ggKbase home page

SCNpilot_cont_300_bf_scaffold_2384

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2384_1
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..2279)
DNA (2277bp) protein (759aa)
UvrABC system protein B n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HVG9_PARL1
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_0
excinuclease ABC subunit B
SCNpilot_cont_300_bf_scaffold_2384_2
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

2414..3265
DNA (852bp) protein (284aa)
Putative Dioxygenase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBT0_9BACT
putative dioxygenase
Putative Dioxygenase {ECO:0000313|EMBL:CBK40689.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
SCNpilot_cont_300_bf_scaffold_2384_3
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3288..3914)
DNA (627bp) protein (209aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|
folE; GTP cyclohydrolase I (EC:3.5.4.16)
GTP cyclohydrolase I n=1 Tax=Novispirillum itersonii RepID=UPI00035CA2BB rbh
SCNpilot_cont_300_bf_scaffold_2384_4
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4029..4472)
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00037EBE10
apaG; protein associated with Co2+ and Mg2+ efflux
Protein ApaG {ECO:0000256|HAMAP-Rule:MF_00791, ECO:0000256|SAAS:SAAS00014786}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;
SCNpilot_cont_300_bf_scaffold_2384_5
R_Alphaproteobacteria_63_12, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4545..5000)
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Demetria terragena RepID=UPI00037F9696
OsmC family protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_63_12_curated
OsmC family protein
SCNpilot_cont_300_bf_scaffold_2384_6
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5040..6233)
DNA (1194bp) protein (398aa)
O-succinylhomoserine sulfhydrylase (EC:4.4.1.11)
O-succinylhomoserine sulfhydrylase n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A3W5_STAND
O-succinylhomoserine sulfhydrylase {ECO:0000313|EMBL:GAK45552.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
SCNpilot_cont_300_bf_scaffold_2384_7
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6440..6850
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQ69_PARL1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS62052.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivor
SCNpilot_cont_300_bf_scaffold_2384_8
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6873..7403
DNA (531bp) protein (177aa)
Phosphohistidine phosphatase SixA n=1 Tax=Rhodovulum sp. PH10 RepID=J6UBI5_9RHOB
Phosphohistidine phosphatase SixA {ECO:0000313|EMBL:EJW10039.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovul
sixA; phosphohistidine phosphatase
SCNpilot_cont_300_bf_scaffold_2384_9
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7412..8869)
DNA (1458bp) protein (486aa)
Sulfatase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HXW1_PARL1
sulfatase
Sulfatase {ECO:0000313|EMBL:ABS64744.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS
SCNpilot_cont_300_bf_scaffold_2384_10
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8869..9411)
DNA (543bp) protein (181aa)
Acetyltransferase, GNAT family n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IYD6_RHOCS
GNAT family acetyltransferase {ECO:0000313|EMBL:KJB92206.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanel
acetyltransferase, GNAT family
SCNpilot_cont_300_bf_scaffold_2384_11
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9534..10208)
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00035E259D
PEP-CTERM putative exosortase interaction domain-containing protein
PEP-CTERM putative exosortase interaction domain-containing protein {ECO:0000313|EMBL:AGF78721.1}; Flags: Precursor;; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacte
Displaying 11 items

View Taxonomy