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SCNpilot_cont_300_bf_scaffold_2410

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2410_1
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..811)
DNA (810bp) protein (270aa)
Peptidase M23B n=1 Tax=alpha proteobacterium BAL199 RepID=A8U3C5_9PROT
Peptidase M23B {ECO:0000313|EMBL:EDP61316.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
peptidase M23
SCNpilot_cont_300_bf_scaffold_2410_2
RBG_16_Alphaproteobacteria_64_48_curated, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(830..1057)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IF69_XANP2
hypothetical protein Tax=RBG_16_Alphaproteobacteria_64_48_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2410_3
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1104..2522)
DNA (1419bp) protein (473aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclea
Exodeoxyribonuclease 7 large subunit n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IF68_XANP2
xseA; exodeoxyribonuclease VII large subunit
SCNpilot_cont_300_bf_scaffold_2410_4
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2596..3873
DNA (1278bp) protein (426aa)
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {EC
Phosphoribosylamine--glycine ligase n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07HQ2_RHOP5
SCNpilot_cont_300_bf_scaffold_2410_5
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3937..5031
DNA (1095bp) protein (365aa)
Aminoglycoside phosphotransferase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQQ8_PARL1 rbh
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:GAK44984.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
aminoglycoside phosphotransferase
SCNpilot_cont_300_bf_scaffold_2410_6
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5176..6240
DNA (1065bp) protein (355aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQT8_PARL1
PAS/PAC sensor signal transduction histidine kinase
SCNpilot_cont_300_bf_scaffold_2410_7
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6328..6690
DNA (363bp) protein (121aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibac
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQT8_PARL1
PAS/PAC sensor signal transduction histidine kinase
SCNpilot_cont_300_bf_scaffold_2410_8
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6767..8008)
DNA (1242bp) protein (414aa)
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:CDO60389.1}; EC=1.3.8.7 {ECO:0000313|EMBL:CDO60389.1};; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" s
PREDICTED: acyl-CoA dehydrogenase family member 10-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C119B4
acyl-CoA dehydrogenase domain-containing protein
SCNpilot_cont_300_bf_scaffold_2410_9
GWC2_Syntrophus_56_31_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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8153..8773
DNA (621bp) protein (207aa)
Phosphoesterase PA-phosphatase related id=3729048 bin=GWC2_Syntrophus__56_31 species=Chlorobium limicola genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
PA-phosphatase-like phosphoesterase Tax=GWC2_Syntrophus_56_31_curated
PA-phosphatase-like phosphoesterase
SCNpilot_cont_300_bf_scaffold_2410_10
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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8796..9545
DNA (750bp) protein (250aa)
Integral membrane protein TerC n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SSH5_NITWN
integral membrane protein TerC
Membrane protein {ECO:0000313|EMBL:KJB94897.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata K
SCNpilot_cont_300_bf_scaffold_2410_11
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9552..10958)
DNA (1407bp) protein (469aa)
Major facilitator superfamily MFS_1 n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HWD6_PARL1 rbh
major facilitator superfamily transporter
MFS/sugar transport family protein {ECO:0000313|EMBL:CDO58444.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinoba
SCNpilot_cont_300_bf_scaffold_2410_12
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10967..11635)
DNA (669bp) protein (223aa)
Glutathione S-transferase domain n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQJ7_PARL1
Glutathione S-transferase family protein {ECO:0000313|EMBL:CDO61170.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeoma
glutathione S-transferase domain-containing protein
SCNpilot_cont_300_bf_scaffold_2410_13

Not on your lists

comp(11710..12159)
DNA (450bp) protein (150aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1447233 species="Bacteria; environmental samples.;" source="uncultured bacter
CMP/dCMP deaminase zinc-binding n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQT5_PARL1
tRNA-specific adenosine-34 deaminase
SCNpilot_cont_300_bf_scaffold_2410_14
Hyphomonas polymorpha, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12156..12485)
DNA (330bp) protein (110aa)
Antibiotic biosynthesis monooxygenase domain protein n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0C4W6_HYPNA
Antibiotic biosynthesis monooxygenase domain-containing protein {ECO:0000313|EMBL:KDA00171.1}; TaxID=1280954 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; H
antibiotic biosynthesis monooxygenase domain-containing protein
SCNpilot_cont_300_bf_scaffold_2410_15

Not on your lists

12554..13300
DNA (747bp) protein (249aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1447233 species="Bacteria; environmental samples.;" source="uncultured bacterium 12AC_lac13.
Pseudouridine synthase n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2Z7Q5_9PROT
RNA pseudouridylate synthase
SCNpilot_cont_300_bf_scaffold_2410_16
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13369..13839)
DNA (471bp) protein (157aa)
aldehyde-activating protein n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00036AFEAA
Uncharacterized protein {ECO:0000313|EMBL:KEC82014.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" so
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2410_17
unknown

Not on your lists

14599..15216
DNA (618bp) protein (206aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2410_18
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15213..15968
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Paracoccus sp. N5 RepID=UPI0003745136
Uncharacterized protein {ECO:0000313|EMBL:KGI78840.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas s
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2410_19
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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16006..16821
DNA (816bp) protein (272aa)
N-acetyltransferase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G9S6_NOVAD
N-acetyltransferase {ECO:0000313|EMBL:CDX26105.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifari
N-acetyltransferase
SCNpilot_cont_300_bf_scaffold_2410_20
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16965..17723)
DNA (759bp) protein (253aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A1Y8_STAND
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:GAK46134.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_cont_300_bf_scaffold_2410_21
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17734..18609)
DNA (876bp) protein (292aa)
Cation diffusion facilitator family transporter n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HR81_PARL1 rbh
cation diffusion facilitator family transporter Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
cation diffusion facilitator family transporter
Displaying 21 items

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