ggKbase home page

SCNpilot_cont_300_bf_scaffold_2583

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2583_1

Not on your lists

comp(1..873)
DNA (873bp) protein (291aa)
Phage terminase-like protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JM89_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KKN94444.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
phage terminase
SCNpilot_cont_300_bf_scaffold_2583_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(845..1249)
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=alpha proteobacterium L41A RepID=UPI00037A4684
Terminase {ECO:0000313|EMBL:KIZ43103.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
phage terminase, small subunit , P27
SCNpilot_cont_300_bf_scaffold_2583_3
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1249..1839)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4TGM7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESR25253.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense A
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2583_4
Desulfovibrio vulgaris, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1854..3068)
DNA (1215bp) protein (405aa)
Uncharacterized protein n=2 Tax=Desulfovibrio vulgaris RepID=E3ISY0_DESVR
tail tape meausure protein
Tail tape meausure protein, putative {ECO:0000313|EMBL:AAS96630.1}; TaxID=882 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="
SCNpilot_cont_300_bf_scaffold_2583_5
unknown

Not on your lists

3166..3891
DNA (726bp) protein (242aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2583_6
unknown

Not on your lists

comp(3849..4199)
DNA (351bp) protein (117aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2583_7
Roseibium sp. TrichSKD4, Roseibium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4441..4713)
DNA (273bp) protein (91aa)
Phage protein, HK97 gp10 family n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CGS8_9RHOB
Phage protein, HK97 gp10 family {ECO:0000313|EMBL:EFO32616.1}; TaxID=744980 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseibium.;" source="Roseibium sp
HK97 family phage protein
SCNpilot_cont_300_bf_scaffold_2583_8
unknown

Not on your lists

comp(4697..5086)
DNA (390bp) protein (130aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2583_9
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5083..5970)
DNA (888bp) protein (296aa)
Uncharacterized protein n=2 Tax=Paracoccus aminophilus JCM 7686 RepID=S5XZ68_PARAH
hypothetical protein
HNH nuclease {ECO:0000313|EMBL:AGT09974.1}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 76
SCNpilot_cont_300_bf_scaffold_2583_10
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6097..6528)
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI000360EE1C
Uncharacterized protein {ECO:0000313|EMBL:KIZ41436.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas p
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2583_11
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6547..7722)
DNA (1176bp) protein (392aa)
Phage major capsid protein, HK97 family n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QKW0_METTR rbh
Phage major capsid protein {ECO:0000313|EMBL:ESR25251.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangens
phage major capsid protein
SCNpilot_cont_300_bf_scaffold_2583_12
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7719..8258)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0PR26_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCM76258.1}; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
peptidase U35, phage prohead HK97
SCNpilot_cont_300_bf_scaffold_2583_13
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8255..9430)
DNA (1176bp) protein (392aa)
Phage portal protein n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RPY8_9RHIZ rbh
Phage portal protein {ECO:0000313|EMBL:ESR25250.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1
Portal protein-like protein
SCNpilot_cont_300_bf_scaffold_2583_14
unknown

Not on your lists

9942..10652
DNA (711bp) protein (237aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2583_15
unknown

Not on your lists

comp(10786..11127)
DNA (342bp) protein (114aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2583_16
unknown

Not on your lists

comp(11245..11511)
DNA (267bp) protein (89aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2583_17
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11508..11765)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QKW8_METTR
Uncharacterized protein {ECO:0000313|EMBL:KJR67290.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum th
phage-like protein
SCNpilot_cont_300_bf_scaffold_2583_18
unknown

Not on your lists

comp(11783..12559)
DNA (777bp) protein (259aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2583_19
unknown

Not on your lists

comp(12731..13057)
DNA (327bp) protein (109aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2583_20
unknown

Not on your lists

comp(13057..13422)
DNA (366bp) protein (122aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2583_21
unknown

Not on your lists

13910..14131
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2583_22
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14146..14382
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. viciae (strain 3841) RepID=Q1MCA0_RHIL3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAK09431.1}; TaxID=216596 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
SCNpilot_cont_300_bf_scaffold_2583_23
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14379..15710)
DNA (1332bp) protein (444aa)
Putative Phage integrase family protein n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FTV3_PHAMO rbh
phage integrase family Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
phage integrase family
SCNpilot_cont_300_bf_scaffold_2583_24
Burkholderia sp. MR1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16195..17697
DNA (1503bp) protein (501aa)
oxidoreductase n=1 Tax=Burkholderia bryophila RepID=UPI0003764870 rbh
GMC oxidoreductase {ECO:0000313|EMBL:KIG07717.1}; TaxID=870478 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. MR1.;"
GMC oxidoreductase
SCNpilot_cont_300_bf_scaffold_2583_25
unknown

Not on your lists

17694..18077
DNA (384bp) protein (128aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2583_26
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18136..19908)
DNA (1773bp) protein (591aa)
Para-aminobenzoate synthase, subunit I n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J996_HYPSM
Para-aminobenzoate synthase subunit I
Para-aminobenzoate synthase, subunit I {ECO:0000313|EMBL:CCB67413.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyp
SCNpilot_cont_300_bf_scaffold_2583_27
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20141..20578
DNA (438bp) protein (146aa)
Heat shock protein Hsp20 n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HPH8_PARL1
heat shock protein Hsp20
Heat shock protein Hsp20 {ECO:0000313|EMBL:ABS61811.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivo
SCNpilot_cont_300_bf_scaffold_2583_28
unknown

Not on your lists

20697..20963
DNA (267bp) protein (89aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2583_29
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21042..21515)
DNA (474bp) protein (158aa)
PTS IIA-like nitrogen-regulatory protein PtsN n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HPI0_PARL1
PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN
PTS IIA-like nitrogen-regulatory protein PtsN {ECO:0000313|EMBL:ABS61813.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Par
Displaying 29 items

View Taxonomy