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SCNpilot_cont_300_bf_scaffold_2654

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2654_1
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..973)
DNA (972bp) protein (324aa)
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:GAO53469.1}; EC=6.2.1.3 {ECO:0000313|EMBL:GAO53469.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphi
acyl-CoA synthetase n=1 Tax=Cupriavidus sp. WS RepID=UPI000366E622
long-chain-fatty-acid--CoA ligase
SCNpilot_cont_300_bf_scaffold_2654_2
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1015..2079)
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HS70_PARL1 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS62753.1}; Flags: Precursor;; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvib
SCNpilot_cont_300_bf_scaffold_2654_3
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2093..3571)
DNA (1479bp) protein (493aa)
Sulfatase n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SY54_CAUSK
sulfatase
Sulfatase {ECO:0000313|EMBL:ABZ71801.1}; Flags: Precursor;; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter s
SCNpilot_cont_300_bf_scaffold_2654_4
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3748..4554)
DNA (807bp) protein (269aa)
PREDICTED: arylsulfatase D-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C100C4
Arylsulfatase A family protein {ECO:0000313|EMBL:ENZ81845.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacte
sulfatase
SCNpilot_cont_300_bf_scaffold_2654_5
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4551..5258)
DNA (708bp) protein (236aa)
Sulfatase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GWE7_SPHAL
sulfatase
Sulfatase {ECO:0000313|EMBL:ABF52025.1}; Flags: Precursor;; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyx
SCNpilot_cont_300_bf_scaffold_2654_6
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5316..6509)
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HWZ3_PARL1
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2654_7
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6871..8697)
DNA (1827bp) protein (609aa)
DNA mismatch repair protein MutL n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HPT3_PARL1 rbh
mutL; DNA mismatch repair protein
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvi
SCNpilot_cont_300_bf_scaffold_2654_8
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8853..10199)
DNA (1347bp) protein (449aa)
peptidase M16 (EC:3.4.24.-)
Peptidase M16, putative {ECO:0000313|EMBL:ACJ00939.1}; EC=3.4.24.- {ECO:0000313|EMBL:ACJ00939.1};; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillac
Peptidase M16, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IXB5_RHOCS
SCNpilot_cont_300_bf_scaffold_2654_9
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10196..11569)
DNA (1374bp) protein (458aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P9Q4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36926.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
protease
SCNpilot_cont_300_bf_scaffold_2654_10
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11636..12097)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TPN9_TISMK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK54727.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis
SCNpilot_cont_300_bf_scaffold_2654_11
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12198..12710)
DNA (513bp) protein (171aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal pep
peptidase A8 n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI000346156E
lipoprotein signal peptidase
SCNpilot_cont_300_bf_scaffold_2654_12
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12707..15610)
DNA (2904bp) protein (968aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0
Isoleucine--tRNA ligase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HPS7_PARL1
isoleucyl-tRNA synthetase
SCNpilot_cont_300_bf_scaffold_2654_13
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15627..16358)
DNA (732bp) protein (244aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=402881 species="Bacteria; Proteobacter
Riboflavin biosynthesis protein RibF n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQT1_PARL1
riboflavin biosynthesis protein RibF
SCNpilot_cont_300_bf_scaffold_2654_14
unknown

Not on your lists

comp(16585..17007)
DNA (423bp) protein (141aa)
(R)-specific enoyl-CoA hydratase (Modular protein) {ECO:0000313|EMBL:CPR14948.1}; EC=4.2.1.119 {ECO:0000313|EMBL:CPR14948.1};; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhi
Acyl dehydratase n=1 Tax=Beggiatoa alba B18LD RepID=I3CFC5_9GAMM
putative acyl dehydratase
SCNpilot_cont_300_bf_scaffold_2654_15
Methylobacterium sp. ME121, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17051..17905)
DNA (855bp) protein (285aa)
HAD-superfamily hydrolase, subfamily IIA n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1M2K7_METRJ
HAD family hydrolase
HAD family hydrolase {ECO:0000313|EMBL:GAN51473.1}; TaxID=1604132 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium
SCNpilot_cont_300_bf_scaffold_2654_16
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17993..19243)
DNA (1251bp) protein (417aa)
Diguanylate phosphodiesterase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HPQ8_PARL1 rbh
Uncharacterized protein {ECO:0000313|EMBL:CDO60374.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectoca
diguanylate phosphodiesterase
SCNpilot_cont_300_bf_scaffold_2654_17
unknown

Not on your lists

comp(19896..20507)
DNA (612bp) protein (204aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2654_18
unknown

Not on your lists

20865..21050
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2654_19

Not on your lists

comp(21045..21704)
DNA (660bp) protein (220aa)
DNA modification methylase n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3YEH5_THIV6
DNA modification methylase
Uncharacterized protein {ECO:0000313|EMBL:KKL28971.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCNpilot_cont_300_bf_scaffold_2654_20
unknown

Not on your lists

21942..22283
DNA (342bp) protein (114aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2654_21
unknown

Not on your lists

22270..22521
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2654_22
unknown

Not on your lists

22521..22907
DNA (387bp) protein (129aa)

This feature has no annotations

Displaying 22 items

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