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SCNpilot_cont_300_bf_scaffold_2922

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2922_1
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..539)
DNA (537bp) protein (179aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; P
Homoserine dehydrogenase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HXC0_PARL1
homoserine dehydrogenase
SCNpilot_cont_300_bf_scaffold_2922_2
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(536..1744)
DNA (1209bp) protein (403aa)
Aspartate aminotransferase {ECO:0000313|EMBL:CDO61304.1}; EC=2.6.1.1 {ECO:0000313|EMBL:CDO61304.1};; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.
aspartate aminotransferase (EC:2.6.1.1)
PREDICTED: aspartate aminotransferase-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C157FE rbh
SCNpilot_cont_300_bf_scaffold_2922_3
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1828..2943)
DNA (1116bp) protein (372aa)
Adenylate cyclase {ECO:0000313|EMBL:CDO61305.1}; EC=4.6.1.1 {ECO:0000313|EMBL:CDO61305.1};; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source
Putative uncharacterized protein n=1 Tax=Chlorella variabilis RepID=E1ZL43_CHLVA
OmpA/MotB protein
SCNpilot_cont_300_bf_scaffold_2922_4
unknown

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comp(3187..3795)
DNA (609bp) protein (203aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2922_5
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

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4065..4943
DNA (879bp) protein (293aa)
Poly(R)-hydroxyalkanoic acid synthase, class I n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HXB7_PARL1
Poly(R)-hydroxyalkanoic acid synthase, class I {ECO:0000313|EMBL:GAK44088.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
poly(R)-hydroxyalkanoic acid synthase
SCNpilot_cont_300_bf_scaffold_2922_6
Lacinutrix sp. 5H-3-7-4, Lacinutrix, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(5265..5597)
DNA (333bp) protein (111aa)
Excinuclease ABC C subunit domain protein n=1 Tax=Lacinutrix sp. (strain 5H-3-7-4) RepID=F6GH55_LACS5
excinuclease ABC C subunit domain-containing protein
Excinuclease ABC C subunit domain protein {ECO:0000313|EMBL:AEH02180.1}; TaxID=983544 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Lacinutrix.;" source="Lacin
SCNpilot_cont_300_bf_scaffold_2922_7
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5669..6619)
DNA (951bp) protein (317aa)
argC; N-acetyl-gamma-glutamyl-phosphate reductase; K00145 N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V2F1_SPHWW
SCNpilot_cont_300_bf_scaffold_2922_8
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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6938..7444
DNA (507bp) protein (169aa)
Uncharacterized protein n=2 Tax=Desulfovibrio RepID=D9Y9X8_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW50839.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovib
yhaI; inner membrane protein yhaI
SCNpilot_cont_300_bf_scaffold_2922_9
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

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7469..8413
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9U3G9_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:KIJ80993.1}; TaxID=1233231 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides VB-61278.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2922_10
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8456..8980)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y838_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD49361.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2922_11
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9029..10381)
DNA (1353bp) protein (451aa)
TPR repeat-containing protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RVH0_ACCPU
TPR repeat-containing protein Tax=CG_Rhodocyc_01
TPR repeat-containing protein
SCNpilot_cont_300_bf_scaffold_2922_12
Desulfovibrio alkalitolerans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10484..11527)
DNA (1044bp) protein (348aa)
PEP motif putative anchor domain protein n=1 Tax=Desulfovibrio alkalitolerans DSM 16529 RepID=S7TBL3_9DELT
PEP motif putative anchor domain protein {ECO:0000313|EMBL:EPR34552.1}; TaxID=1121439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2922_13
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(11794..12291)
DNA (498bp) protein (166aa)
30S ribosomal protein S9 n=1 Tax=Maricaulis sp. JL2009 RepID=UPI0003A98948
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
30S ribosomal protein S9
SCNpilot_cont_300_bf_scaffold_2922_14
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(12295..12711)
DNA (417bp) protein (139aa)
50S ribosomal protein L13 n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F6D2BE
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083943}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rho
rplM; 50S ribosomal protein L13
SCNpilot_cont_300_bf_scaffold_2922_15
unknown

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comp(12960..13610)
DNA (651bp) protein (217aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2922_16
unknown

Not on your lists

comp(13647..13775)
DNA (129bp) protein (43aa)

This feature has no annotations

Displaying 16 items

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