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SCNpilot_cont_300_bf_scaffold_2950

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2950_1
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..1377
DNA (1377bp) protein (459aa)
Major facilitator superfamily MFS_1 n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T6N4_CAUSK rbh
major facilitator transporter Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
major facilitator transporter
SCNpilot_cont_300_bf_scaffold_2950_2
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1560..2081
DNA (522bp) protein (174aa)
PKHD-type hydroxylase G432_04900 {ECO:0000256|HAMAP-Rule:MF_00657}; EC=1.14.11.- {ECO:0000256|HAMAP-Rule:MF_00657};; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadal
PKHD-type hydroxylase G432_04900 n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SDI2_9SPHN
putative hydroxylase
SCNpilot_cont_300_bf_scaffold_2950_3
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(2094..2447)
DNA (354bp) protein (118aa)
Uncharacterized protein {ECO:0000313|EMBL:KIF22802.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
SCNpilot_cont_300_bf_scaffold_2950_4
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2488..3051)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GRV1_SPHAL
Uncharacterized protein {ECO:0000313|EMBL:KGB54798.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2950_5
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3048..3656)
DNA (609bp) protein (203aa)
Transcriptional regulator, TetR family n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RG43_PHEZH
transcriptional regulator, TetR family
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ACG77167.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source
SCNpilot_cont_300_bf_scaffold_2950_6
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3758..4846
DNA (1089bp) protein (363aa)
Retinal pigment epithelial membrane protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RG44_PHEZH
retinal pigment epithelial membrane protein
Retinal pigment epithelial membrane protein {ECO:0000313|EMBL:ACG77168.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" s
SCNpilot_cont_300_bf_scaffold_2950_7
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4818..5102
DNA (285bp) protein (95aa)
Retinal pigment epithelial membrane protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RG44_PHEZH
retinal pigment epithelial membrane protein
Retinal pigment epithelial membrane protein {ECO:0000313|EMBL:ACG77168.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" s
SCNpilot_cont_300_bf_scaffold_2950_8
Pseudanabaena biceps, Pseudanabaena, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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5605..6516
DNA (912bp) protein (304aa)
Metallophosphoesterase n=1 Tax=Pseudanabaena biceps PCC 7429 RepID=L8MTS8_9CYAN
Metallophosphoesterase {ECO:0000313|EMBL:ELS30836.1}; Flags: Precursor;; TaxID=927668 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Pseudanabaena.;" source="Pseudanabaena b
metallophosphoesterase
SCNpilot_cont_300_bf_scaffold_2950_9
unknown

Not on your lists

comp(7240..8190)
DNA (951bp) protein (317aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2950_10
unknown

Not on your lists

comp(8230..8634)
DNA (405bp) protein (135aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2950_11
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9018..9893
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI00036659F9
conserved Large extracellular alpha-helical protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:CDL00754.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospi
SCNpilot_cont_300_bf_scaffold_2950_12
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9871..11364
DNA (1494bp) protein (498aa)
Alpha-2-macroglobulin, N-terminal:N/apple PAN n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TU55_9PROT
Alpha-2-macroglobulin, N-terminal:N/apple PAN {ECO:0000313|EMBL:CAM74162.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;
conserved Large extracellular alpha-helical protein of unknown function
SCNpilot_cont_300_bf_scaffold_2950_13
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11375..13459
DNA (2085bp) protein (695aa)
pbpC; Penicillin-binding protein 1C (PBP-1C); Penicillin-insensitive transglycosylase (Peptidoglycan TGase)(N-terminal); Transpeptidase-like module (C-terminal) (EC:2.4.2.-)
Penicillin-binding protein 1C (PBP-1C) Penicillin-insensitive transglycosylase (Peptidoglycan TGase)(N-terminal) Transpeptidase-like module (C-terminal) {ECO:0000313|EMBL:CDL00755.1}; EC=2.4.2.- {ECO:
Penicillin-binding protein 1C (PBP-1C) Penicillin-insensitive transglycosylase (Peptidoglycan TGase)(N-terminal) Transpeptidase-like module (C-terminal) n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F5G6_9PROT rbh
SCNpilot_cont_300_bf_scaffold_2950_14
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13730..15052
DNA (1323bp) protein (441aa)
Major facilitator superfamily transporter n=1 Tax=Oceanibaculum indicum P24 RepID=K2JLX4_9PROT rbh
Multidrug-efflux transporter {ECO:0000313|EMBL:CDO58971.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter e
major facilitator superfamily transporter
SCNpilot_cont_300_bf_scaffold_2950_15
Pseudomonas sp. AAC, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15053..16357)
DNA (1305bp) protein (435aa)
Putative murein transglycosylase n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1HX93_PSEUO
Murein transglycosylase {ECO:0000313|EMBL:KES20385.1}; TaxID=1502784 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. A
murein transglycosylase
SCNpilot_cont_300_bf_scaffold_2950_16
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16576..16701
DNA (126bp) protein (42aa)
50S ribosomal protein L36 n=1 Tax=Asaia sp. SF2.1 RepID=V8A9Y9_9PROT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2950_17
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16981..17334
DNA (354bp) protein (118aa)
TPR repeat-containing protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HUQ9_PARL1
TPR repeat-containing protein {ECO:0000313|EMBL:GAK45671.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2950_18
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17350..18738)
DNA (1389bp) protein (463aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2
Pyruvate kinase n=2 Tax=Mesorhizobium amorphae RepID=G6YDR3_9RHIZ
pyruvate kinase
SCNpilot_cont_300_bf_scaffold_2950_19
Pseudovibrio sp. FO-BEG1, Pseudovibrio, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18741..19103)
DNA (363bp) protein (121aa)
Putative uncharacterized protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R727_9RHOB
hypothetical protein
Protein containing DUF1036 {ECO:0000313|EMBL:AEV39268.1}; TaxID=911045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pseudovibrio.;" source="Pseudovibrio s
SCNpilot_cont_300_bf_scaffold_2950_20
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19238..20329
DNA (1092bp) protein (364aa)
N-formylglutamate amidohydrolase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HUR3_PARL1
N-formylglutamate amidohydrolase
N-formylglutamate amidohydrolase {ECO:0000313|EMBL:ABS63646.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lav
SCNpilot_cont_300_bf_scaffold_2950_21
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20404..20646
DNA (243bp) protein (81aa)
UPF0335 protein Plav_2034 n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=Y2034_PARL1
hypothetical protein
UPF0335 protein Plav_2034 {ECO:0000255|HAMAP-Rule:MF_00797}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavame
SCNpilot_cont_300_bf_scaffold_2950_22
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20619..22175)
DNA (1557bp) protein (519aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=2 Tax=Pseudovibrio RepID=G8PKV2_PSEUV rbh
Response regulatory protein {ECO:0000313|EMBL:CDO58957.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ec
two component, sigma54 specific, transcriptional regulator, Fis family
SCNpilot_cont_300_bf_scaffold_2950_23
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22287..23330
DNA (1044bp) protein (348aa)
UPI0003CFE023 related cluster n=1 Tax=unknown RepID=UPI0003CFE023
Uncharacterized protein {ECO:0000313|EMBL:ESZ14980.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2950_24
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23344..23793
DNA (450bp) protein (150aa)
Thioesterase superfamily protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HUT5_PARL1
thioesterase superfamily protein
Thioesterase superfamily protein {ECO:0000313|EMBL:ABS63668.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lav
SCNpilot_cont_300_bf_scaffold_2950_25
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23795..24847
DNA (1053bp) protein (351aa)
Alpha/beta hydrolase fold n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HUT6_PARL1 rbh
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold {ECO:0000313|EMBL:ABS63669.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentiv
SCNpilot_cont_300_bf_scaffold_2950_26
unknown

Not on your lists

24935..25081
DNA (147bp) protein (49aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2950_27
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25106..26236
DNA (1131bp) protein (377aa)
NAD(P) transhydrogenase alpha subunit {ECO:0000313|EMBL:CDO58950.1}; EC=1.6.1.2 {ECO:0000313|EMBL:CDO58950.1};; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeoma
pntAA; NAD(P) transhydrogenase subunit alpha part 1 (EC:1.6.1.2)
NAD(P) transhydrogenase subunit alpha n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6ITS8_RHOCS rbh
SCNpilot_cont_300_bf_scaffold_2950_28
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26240..26545
DNA (306bp) protein (102aa)
NAD(P) transhydrogenase alpha subunit {ECO:0000313|EMBL:CDP52891.1}; EC=1.6.1.2 {ECO:0000313|EMBL:CDP52891.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hypho
NAD(P) transhydrogenase subunit alpha part n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HUU0_PARL1
NAD(P) transhydrogenase subunit alpha
SCNpilot_cont_300_bf_scaffold_2950_29
Rhodomicrobium udaipurense, Rhodomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26553..27839
DNA (1287bp) protein (429aa)
NAD(P)(+) transhydrogenase (EC:1.6.1.2)
NAD(P) transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; EC=1.6.1.2 {ECO:0000256|PIRNR:PIRNR000204};; Nicotinamide nucleotide transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}
NAD(P) transhydrogenase subunit beta n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A1R0_STAND
SCNpilot_cont_300_bf_scaffold_2950_30
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27782..27895
DNA (114bp) protein (38aa)
NAD(P)(+) transhydrogenase (EC:1.6.1.2)
NAD(P) transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; EC=1.6.1.2 {ECO:0000256|PIRNR:PIRNR000204};; Nicotinamide nucleotide transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}
NAD(P) transhydrogenase subunit beta n=3 Tax=Acidiphilium RepID=A5G0H2_ACICJ
Displaying items 1-30 of 32 in total

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