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SCNpilot_cont_300_bf_scaffold_4280

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Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_4280_1
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

139..561
DNA (423bp) protein (141aa)
nucleoside diphosphate kinase regulator n=1 Tax=Methylobacterium sp. MB200 RepID=UPI000346C882
Nucleoside diphosphate kinase regulator {ECO:0000313|EMBL:KJR64054.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source=
GreA/GreB family elongation factor
SCNpilot_cont_300_bf_scaffold_4280_2

Not on your lists

comp(575..1099)
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Meganema perideroedes RepID=UPI00035F4B60
Uncharacterized protein {ECO:0000313|EMBL:KKO12687.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_4280_3
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1146..1496)
DNA (351bp) protein (117aa)
4Fe-4S ferredoxin, iron-sulfur binding protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11CX6_MESSB
4Fe-4S ferredoxin
4Fe-4S ferredoxin, iron-sulfur binding protein {ECO:0000313|EMBL:ABG64749.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" sou
SCNpilot_cont_300_bf_scaffold_4280_4
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1493..1960)
DNA (468bp) protein (156aa)
Truncated hemoglobin protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RAJ0_PHEZH
truncated hemoglobin protein
Truncated hemoglobin protein {ECO:0000313|EMBL:ACG79588.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylob
SCNpilot_cont_300_bf_scaffold_4280_5
Acidomonas methanolica, Acidomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2129..3667)
DNA (1539bp) protein (513aa)
nitric oxide reductase n=1 Tax=Burkholderia thailandensis RepID=UPI00036E50BE
Nitric oxide reductase subunit B {ECO:0000313|EMBL:GAJ30419.1}; TaxID=1231351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidomonas.;" source="Acidomon
cytochrome C and Quinol oxidase polypeptide I family protein
SCNpilot_cont_300_bf_scaffold_4280_6
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3852..4331)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NHP0_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS29847.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_4280_7
Burkholderia sp. Ch1-1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4421..5137
DNA (717bp) protein (239aa)
cAMP-binding protein n=1 Tax=Burkholderia sp. Ch1-1 RepID=I2IE70_9BURK
cAMP-binding protein {ECO:0000313|EMBL:EIF29022.1}; TaxID=243261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. Ch1-
Crp/FNR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_4280_8
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5312..6376
DNA (1065bp) protein (355aa)
NnrS n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQG1_NITHX
protein NnrS
NnrS {ECO:0000313|EMBL:ABE61536.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / D
SCNpilot_cont_300_bf_scaffold_4280_9
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6386..7264)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Caulobacter crescentus OR37 RepID=R0CVU2_CAUCE
Uncharacterized protein {ECO:0000313|EMBL:ENZ80480.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter cresc
biofilm formation and stress response factor BsmA
SCNpilot_cont_300_bf_scaffold_4280_10
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7271..7903)
DNA (633bp) protein (211aa)
Peroxiredoxin-like protein DDB_G0282517, mitochondrial {ECO:0000313|EMBL:CDX39885.1}; EC=1.11.1.- {ECO:0000313|EMBL:CDX39885.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rh
Alkyl hydroperoxide reductase subunit C-like protein n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MJ73_9SPHN rbh
alkyl hydroperoxide reductase subunit C-like protein
SCNpilot_cont_300_bf_scaffold_4280_11
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7936..9669)
DNA (1734bp) protein (578aa)
Sulfite reductase [NADPH] hemoprotein beta-component {ECO:0000255|HAMAP-Rule:MF_01540}; Short=SiR-HP {ECO:0000255|HAMAP-Rule:MF_01540};; Short=SiRHP {ECO:0000255|HAMAP-Rule:MF_01540};; EC=1.8.1.2 {ECO
Sulfite reductase [NADPH] hemoprotein beta-component n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=CYSI_NITHX
sulfite reductase subunit beta
SCNpilot_cont_300_bf_scaffold_4280_12
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9679..11466)
DNA (1788bp) protein (596aa)
Sulfite reductase [NADPH] flavoprotein alpha-component {ECO:0000256|PIRNR:PIRNR000207, ECO:0000256|SAAS:SAAS00014038}; Short=SiR-FP {ECO:0000256|PIRNR:PIRNR000207};; EC=1.8.1.2 {ECO:0000256|PIRNR:PIRN
sulfite reductase (NADPH) flavoprotein subunit alpha (EC:1.14.13.39)
Sulfite reductase [NADPH] flavoprotein alpha-component n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SV34_NITWN
SCNpilot_cont_300_bf_scaffold_4280_13
Burkholderia jiangsuensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11644..12507
DNA (864bp) protein (288aa)
LysR family transcriptional regulator n=1 Tax=Burkholderia terrae BS001 RepID=I5D0W1_9BURK rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:KAK43009.1}; TaxID=1458357 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Bur
LysR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_4280_14
Burkholderia sp. lig30, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12601..14088
DNA (1488bp) protein (496aa)
2-nitropropane dioxygenase NPD n=1 Tax=Burkholderia multivorans (strain ATCC 17616 / 249) RepID=A9AKW1_BURM1 rbh
2-nitropropane dioxygenase NPD {ECO:0000313|EMBL:KDB08584.1}; TaxID=1192124 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholder
2-nitropropane dioxygenase
SCNpilot_cont_300_bf_scaffold_4280_15
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14073..15272)
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DN95_BRAJP
Chloride channel protein {ECO:0000313|EMBL:KGM31612.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limo
hypothetical protein
SCNpilot_cont_300_bf_scaffold_4280_16
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15266..15886)
DNA (621bp) protein (207aa)
Putative chloride channel protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9HWW1_BORPD
chloride channel protein
Putative chloride channel protein {ECO:0000313|EMBL:CAP43663.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella p
SCNpilot_cont_300_bf_scaffold_4280_17
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

15997..16425
DNA (429bp) protein (143aa)
MarR family transcriptional regulator n=1 Tax=mine drainage metagenome RepID=T0YIX4_9ZZZZ
Transcriptional regulator {ECO:0000313|EMBL:CDM65072.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
MarR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_4280_18
R_Alphaproteobacteria_63_12, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16813..17265)
DNA (453bp) protein (151aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_63_12_curated
SCNpilot_cont_300_bf_scaffold_4280_19
bacterium YEK0313, Bacteria

Not on your lists

comp(17502..17960)
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI0003800175
HTH-type transcriptional repressor NsrR {ECO:0000313|EMBL:CEJ11669.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
Rrf2 family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_4280_20
Acetobacter indonesiensis, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18100..18528
DNA (429bp) protein (143aa)
Uroporphyrin-III C-methyltransferase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FUD6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:GAN62039.1}; TaxID=1231340 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter.;" source="Acetobacter indo
hypothetical protein
SCNpilot_cont_300_bf_scaffold_4280_21
gamma proteobacterium HTCC2207, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18674..18931)
DNA (258bp) protein (86aa)
Major facilitator family transporter n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YU91_9GAMM
hypothetical protein
Major facilitator family transporter {ECO:0000313|EMBL:EAS48167.1}; TaxID=314287 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; SAR92 clade.;" source="gamma proteobacterium HTCC220
SCNpilot_cont_300_bf_scaffold_4280_22
marine gamma proteobacterium HTCC2080, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18907..20010)
DNA (1104bp) protein (368aa)
Major facilitator family transporter n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z1W8_9GAMM
Major facilitator family transporter {ECO:0000313|EMBL:EAW41942.1}; TaxID=247639 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="marine gamma proteobacterium H
major facilitator superfamily transporter
SCNpilot_cont_300_bf_scaffold_4280_23
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20012..20302)
DNA (291bp) protein (97aa)
acetolactate synthase catalytic subunit; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
Thiamine pyrophosphate protein n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QIV0_RALPI
thiamine pyrophosphate protein
Displaying 23 items

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