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SCNpilot_cont_300_bf_scaffold_5169

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_5169_1
Hyphomonas beringensis, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..261
DNA (261bp) protein (87aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP
imidazole glycerol phosphate synthase n=1 Tax=Methylobacterium sp. 77 RepID=UPI000378DA99
imidazole glycerol phosphate synthase subunit HisF
SCNpilot_cont_300_bf_scaffold_5169_2
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

258..1214
DNA (957bp) protein (319aa)
Adenylate cyclase n=1 Tax=Caenispirillum salinarum AK4 RepID=K9GZ42_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EWY38466.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella sti
adenylate cyclase
SCNpilot_cont_300_bf_scaffold_5169_3
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1168..1788)
DNA (621bp) protein (207aa)
Putative phosphoglycerate mutase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z7M3_AZOL4
Phosphoglycerate mutase {ECO:0000313|EMBL:KJR66237.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum th
putative phosphoglycerate mutase
SCNpilot_cont_300_bf_scaffold_5169_4
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1812..2336
DNA (525bp) protein (175aa)
Thioesterase superfamily protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HSM9_PARL1
Uncharacterized protein {ECO:0000313|EMBL:CDO59746.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectoca
thioesterase superfamily protein
SCNpilot_cont_300_bf_scaffold_5169_5
Hyphomonas adhaerens, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2837..3361
DNA (525bp) protein (175aa)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01517, ECO:0000256|SAAS:SAAS00060476}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_01517, ECO:0000256|SAAS:SAAS00060476};; TaxID=1280949 species="Bacteria; P
malate dehydrogenase (EC:1.1.1.37)
Malate dehydrogenase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WDC6_9GAMM
SCNpilot_cont_300_bf_scaffold_5169_6
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3419..4018)
DNA (600bp) protein (200aa)
Exodeoxyribonuclease III Xth n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HSN1_PARL1
exodeoxyribonuclease III Xth
Exodeoxyribonuclease III Xth {ECO:0000313|EMBL:ABS62914.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamen
SCNpilot_cont_300_bf_scaffold_5169_7
unknown

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4429..4554
DNA (126bp) protein (42aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_5169_8
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4569..5684)
DNA (1116bp) protein (372aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00018957}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-th
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=TSAD_OCHA4
putative DNA-binding/iron metalloprotein/AP endonuclease
SCNpilot_cont_300_bf_scaffold_5169_9
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5755..6615
DNA (861bp) protein (287aa)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAM
Porphobilinogen deaminase n=1 Tax=Ochrobactrum intermedium M86 RepID=M5K2T9_9RHIZ
hemC; porphobilinogen deaminase
SCNpilot_cont_300_bf_scaffold_5169_10
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6618..7322
DNA (705bp) protein (235aa)
Uroporphyrinogen III synthase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NRL2_AZOS1
uroporphyrinogen III synthase
Uroporphyrinogen III synthase {ECO:0000313|EMBL:BAI71041.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospiril
SCNpilot_cont_300_bf_scaffold_5169_11
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7528..7968)
DNA (441bp) protein (147aa)
TPR repeat-containing protein n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VJK0_CAUST
hypothetical protein
TPR repeat-containing protein {ECO:0000313|EMBL:ADG10409.1}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter
SCNpilot_cont_300_bf_scaffold_5169_12
Oceanicaulis sp. HTCC2633, Oceanicaulis, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7965..9233)
DNA (1269bp) protein (423aa)
flbA n=1 Tax=Ponticaulis koreensis RepID=UPI0003B64A7E
Flagellin modification protein FlmG {ECO:0000313|EMBL:EAP91504.1}; TaxID=314254 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Oceanicaulis.;" source="Oceani
hypothetical protein
SCNpilot_cont_300_bf_scaffold_5169_13
alpha proteobacterium Q-1, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9387..9812
DNA (426bp) protein (142aa)
flagellar biosynthesis repressor FlbT n=1 Tax=Maricaulis sp. JL2009 RepID=UPI0003A2F8AC
Putative flagellum biosynthesis repressor protein FlbT {ECO:0000313|EMBL:GAK34527.1}; TaxID=1492281 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium Q-1.;"
flbT; flagellar biosynthesis repressor FlbT
SCNpilot_cont_300_bf_scaffold_5169_14
alpha proteobacterium Q-1, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9772..10173
DNA (402bp) protein (134aa)
Flagellar FlaF family protein n=1 Tax=Asticcacaulis excentricus (strain ATCC 15261 / DSM 4724 / VKM B-1370 / CB 48) RepID=E8RTC4_ASTEC
Protein FlaF {ECO:0000313|EMBL:GAK34526.1}; TaxID=1492281 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium Q-1.;"
flagellar flaf family protein
SCNpilot_cont_300_bf_scaffold_5169_15
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

11431..12255
DNA (825bp) protein (275aa)
flagellin n=1 Tax=Maricaulis sp. JL2009 RepID=UPI00039DBC07
Flagellin {ECO:0000313|EMBL:KIF26036.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
flagellin domain-containing protein
SCNpilot_cont_300_bf_scaffold_5169_16
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

12357..12686
DNA (330bp) protein (110aa)
Uncharacterized protein {ECO:0000313|EMBL:KIF26032.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
SCNpilot_cont_300_bf_scaffold_5169_17
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12704..13939)
DNA (1236bp) protein (412aa)
DegT/DnrJ/EryC1/StrS aminotransferase n=1 Tax=Oceanibaculum indicum P24 RepID=K2J4N3_9PROT rbh
DegT/DnrJ/EryC1/StrS aminotransferase {ECO:0000313|EMBL:EKE69857.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source=
flagellin modification protein FlmB
SCNpilot_cont_300_bf_scaffold_5169_18
Oceanicaulis sp. HTCC2633, Oceanicaulis, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13939..15030)
DNA (1092bp) protein (364aa)
Flagellin modification protein FlmA n=1 Tax=Oceanicaulis sp. HTCC2633 RepID=A3UE12_9RHOB rbh
Flagellin modification protein FlmA {ECO:0000313|EMBL:EAP91493.1}; TaxID=314254 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Oceanicaulis.;" source="Oceani
polysaccharide biosynthesis protein CapD
SCNpilot_cont_300_bf_scaffold_5169_19
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15088..16752)
DNA (1665bp) protein (555aa)
Uncharacterized protein n=1 Tax=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) RepID=Q39YI3_GEOMG rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB30691.1}; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallire
SCNpilot_cont_300_bf_scaffold_5169_20
Pelobacter carbinolicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17032..18147)
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A5I9_PELCD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA88368.1}; TaxID=338963 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter carbin
SCNpilot_cont_300_bf_scaffold_5169_21
GWC2_Pelobacteraceae_58_13_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18205..18963)
DNA (759bp) protein (253aa)
short-chain dehydrogenase/reductase SDR; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=GWC2_Pelobacteraceae_58_13_curated
Short-chain dehydrogenase/reductase SDR id=4919085 bin=GWC2_Pelobacter_58_13 species=Desulfovibrio salexigens genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good + rbh
short-chain dehydrogenase/reductase SDR
SCNpilot_cont_300_bf_scaffold_5169_22
GWC2_Pelobacteraceae_58_13_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18942..19946)
DNA (1005bp) protein (335aa)
transketolase; K00615 transketolase [EC:2.2.1.1] Tax=GWC2_Pelobacteraceae_58_13_curated
Transketolase central region id=4919087 bin=GWC2_Pelobacter_58_13 species=Desulfovibrio salexigens genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good + rbh
transketolase
SCNpilot_cont_300_bf_scaffold_5169_23
GWC2_Pelobacteraceae_58_13_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19939..20676)
DNA (738bp) protein (246aa)
transketolase; K00615 transketolase [EC:2.2.1.1] Tax=GWC2_Pelobacteraceae_58_13_curated
Transketolase domain protein id=4919088 bin=GWC2_Pelobacter_58_13 species=Desulfovibrio salexigens genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
transketolase
SCNpilot_cont_300_bf_scaffold_5169_24
R_OP11_Gottesmanbacteria_42_22, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(20805..21980)
DNA (1176bp) protein (392aa)
Type 11 methyltransferase n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EJV2_9RHOB
methyltransferase type 11
Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_42_22_curated
SCNpilot_cont_300_bf_scaffold_5169_25
R_OP11_Gottesmanbacteria_42_22, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(22029..22859)
DNA (831bp) protein (277aa)
Putative uncharacterized protein id=4699333 bin=GWC2_CP_Nitrospirae-rel_42_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_42_22_curated
SCNpilot_cont_300_bf_scaffold_5169_26
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22973..23887
DNA (915bp) protein (305aa)
hypothetical protein n=1 Tax=Kordiimonas gwangyangensis RepID=UPI000369FCF6 rbh
N-acetylneuraminate synthase family protein
N-acetylneuraminate synthase family protein {ECO:0000313|EMBL:ABB30698.1}; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source=
SCNpilot_cont_300_bf_scaffold_5169_27
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23884..25650
DNA (1767bp) protein (589aa)
Acylneuraminate cytidylyltransferase id=4919094 bin=GWC2_Pelobacter_58_13 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good + rbh
glycosyltransferase, SpsF domain-containing
Glycosyltransferase, SpsF domain-containing {ECO:0000313|EMBL:ABB30697.1}; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source=
SCNpilot_cont_300_bf_scaffold_5169_28
unknown

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comp(25647..25907)
DNA (261bp) protein (87aa)

This feature has no annotations

Displaying 28 items

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