ggKbase home page

SCNpilot_cont_300_bf_scaffold_1539_8

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_62_8

near complete RP 46 / 55 BSCG 46 / 51 MC: 2 ASCG 10 / 38
Location: comp(7907..9274)

Top 3 Functional Annotations

Value Algorithm Source
Type I secretion outer membrane protein, TolC family n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HXH8_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 48.2
  • Coverage: 454.0
  • Bit_score: 387
  • Evalue 2.20e-104
  • rbh
Type I secretion outer membrane protein, TolC {ECO:0000313|EMBL:CDO61241.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Ph similarity UNIPROT
DB: UniProtKB
  • Identity: 48.0
  • Coverage: 460.0
  • Bit_score: 399
  • Evalue 6.00e-108
TolC family type I secretion outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 48.2
  • Coverage: 454.0
  • Bit_score: 387
  • Evalue 6.20e-105

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Phaeomarinobacter ectocarpi → Candidatus Phaeomarinobacter → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1368
ATGCACCGGTATCTGGCAGCAGTGGCAGTCTGCGCGATCTGCGCCGGCACGCCCGCCATGGCAGACACCTTCACCCTGCAGGAGGCGCTGGGCGTTGCCTACGAGACCAACCCGCAACTGGATGCGGCCCGCGCCAACCAGCGCGCGGTGGACGAAGGCGTGGCGCAGGCCAATGCCGGATGGCGGCCGAAAATCAATGCCGGTGGTGCCTATGGCTATCAGGAGACCACCATCTCCGGCTACGGCACGATCAAATCGCATCCGCTGTCCGGCCAGGTGGAAATCACCCAGCCGATCTTTCGCGGCGGCCAGACCTATGCCGAGGTTTCGCGCGCCAAGGCGCAAGTGCGGGCAGGCCGCGCGCAACTGACGGCGGTGGAGCAATCCGTGCTGCTGGATGCGGTGTCGGCTTACATGAATGTCGTGCGCGATATGGCGACGGTGGATCTGCGGCAGAACAATGTGCGTGTGCTGGACCGGCAGCGGCGGGAAACCAAAGAGCAATTCGATGCCGGCGCCCTGACCCGCACCGATGTTTCGCAATCCGAAGCGCGCCTTGAGGGCGCGCGCGCCGGGCTGATCGCCGCCGAAGCGCAACTGGCGGCATCGCGCGCCCAATTCGAACGCGTGATCGGCCGCCCGCCGGAAACGCTGGACAAGTTGCCGCCGCTGCCCAGATTGCCCAATAGCGAGGATGCAGCCTTGCAGGTCGCGCTGAAGCAGAATCCGGCCCTGCTGTCGGCGCGTGAAACCGCCAAAGCGGCCGACTATGCAGTCGACGATGCGCTGGGCGCCCTGATGCCGAGCTTCGCGGTGACCGGGCAATATCAGTATCAAAAGGGCGGCTACAACACGACCGGGCTGGGCAGCAGCACTCTCGGCACCACCGCGCGCTCTGCGGCGATCCTCGGCCAGCTCAATGTACCGATTTATCAAGGCGGCGCCGACGAGGCGGCGGTGCGGCAGGCCAAGCAGTTCCGCAGCCAGGCGGAACTGAATATCGCGGTATCCGACCGCCAGGTGCGCGAGGCCATCCGCAGCGCGTGGGAAAATTTCGCCGCGGCACAGGCGACGATCAAATCCAATAAGGCACAGGTTGAGGCCGACAAGATCGCCTTTGAAGGGGTCCGGCGCGAACAGCAGGTGGGCGGGCGTACCACGCTGGACGTGTTGAACGCCGAACAGGAATTGCTGAATTCGCAAGTGGCCGTGGTGTCGTCACAACGCGACGCGATCGTGGCGGCCTATCGATTGCTGGCCACGACGGGGGACCTGACCGCCGGAAACCTTGGCCTGAAGGTTTCGCTTTACGATCCGAAAGCCTATTACGACGACAATGCTTCGCGCTGGATCGGGCTCGGCGATTAA
PROTEIN sequence
Length: 456
MHRYLAAVAVCAICAGTPAMADTFTLQEALGVAYETNPQLDAARANQRAVDEGVAQANAGWRPKINAGGAYGYQETTISGYGTIKSHPLSGQVEITQPIFRGGQTYAEVSRAKAQVRAGRAQLTAVEQSVLLDAVSAYMNVVRDMATVDLRQNNVRVLDRQRRETKEQFDAGALTRTDVSQSEARLEGARAGLIAAEAQLAASRAQFERVIGRPPETLDKLPPLPRLPNSEDAALQVALKQNPALLSARETAKAADYAVDDALGALMPSFAVTGQYQYQKGGYNTTGLGSSTLGTTARSAAILGQLNVPIYQGGADEAAVRQAKQFRSQAELNIAVSDRQVREAIRSAWENFAAAQATIKSNKAQVEADKIAFEGVRREQQVGGRTTLDVLNAEQELLNSQVAVVSSQRDAIVAAYRLLATTGDLTAGNLGLKVSLYDPKAYYDDNASRWIGLGD*