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SCNpilot_cont_300_bf_scaffold_1539

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1539_1
Cupriavidus sp. HMR-1, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

136..564
DNA (429bp) protein (143aa)
Esterase n=1 Tax=Cupriavidus sp. HMR-1 RepID=L2EGS0_9BURK
Esterase {ECO:0000313|EMBL:EKZ98545.1}; TaxID=1249621 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HMR-1.;"
esterase
SCNpilot_cont_300_bf_scaffold_1539_2
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(881..1666)
DNA (786bp) protein (262aa)
penicillin-binding protein, beta-lactamase class C Tax=RBG_13_Deltaproteobacteria_65_10_curated
esterase A
scb:SCAB_15651 lipP; esterase/lipase LipP id=1241001 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
SCNpilot_cont_300_bf_scaffold_1539_3
Hyphomonas oceanitis, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1755..2120
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Henriciella marina RepID=UPI000360F3E2
Uncharacterized protein {ECO:0000313|EMBL:KDA04055.1}; TaxID=1280953 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas oceaniti
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1539_4
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2133..2855)
DNA (723bp) protein (241aa)
Hypothetical membrane spanning protein n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BVM2_GRABC
Uncharacterized protein {ECO:0000313|EMBL:GAN77299.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera ru
Putative membrane spanning protein
SCNpilot_cont_300_bf_scaffold_1539_5
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3105..4388)
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5Z1U4_9PROT rbh
Uncharacterized protein {ECO:0000313|EMBL:GAN76015.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera ru
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1539_6
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(4462..7179)
DNA (2718bp) protein (906aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|H
Valine--tRNA ligase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HXI0_PARL1
valS; valyl-tRNA synthetase
SCNpilot_cont_300_bf_scaffold_1539_7
unknown

Not on your lists

comp(7231..7782)
DNA (552bp) protein (184aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1539_8
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7907..9274)
DNA (1368bp) protein (456aa)
Type I secretion outer membrane protein, TolC family n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HXH8_PARL1 rbh
Type I secretion outer membrane protein, TolC {ECO:0000313|EMBL:CDO61241.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Ph
TolC family type I secretion outer membrane protein
SCNpilot_cont_300_bf_scaffold_1539_9
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9316..9909)
DNA (594bp) protein (198aa)
Protein-L-isoaspartate(D-aspartate) O-methyltransferase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11I11_MESSB
Protein-L-isoaspartate(D-aspartate) O-methyltransferase {ECO:0000313|EMBL:KFB09862.1}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratiredu
protein-L-isoaspartate(D-aspartate) O-methyltransferase
SCNpilot_cont_300_bf_scaffold_1539_10
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10443..12590)
DNA (2148bp) protein (716aa)
Resolvase domain n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IJ98_XANP2
Putative resolvase domain-containing protein {ECO:0000313|EMBL:KGJ64288.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" sourc
resolvase domain-containing protein
SCNpilot_cont_300_bf_scaffold_1539_11
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12754..13290)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Rhizobium radiobacter RepID=K7X7I1_RHIRD
Uncharacterized protein {ECO:0000313|EMBL:AFX65588.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agroba
putative transcriptional regulator (modular protein)
SCNpilot_cont_300_bf_scaffold_1539_12
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13502..14401
DNA (900bp) protein (300aa)
Protein tyrosine phosphatase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IMD9_XANP2
protein tyrosine phosphatase
Protein tyrosine phosphatase {ECO:0000313|EMBL:ABS69182.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter aut
SCNpilot_cont_300_bf_scaffold_1539_13
R_Gammaproteobacteria_56_15, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14940..15770
DNA (831bp) protein (277aa)
Phosphate-binding protein n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5XWD9_9FIRM rbh
phosphate ABC transporter substrate-binding protein; K02040 phosphate transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_56_15_curated
phosphate ABC transporter substrate-binding protein
SCNpilot_cont_300_bf_scaffold_1539_14
R_Gammaproteobacteria_56_15, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15835..16887
DNA (1053bp) protein (351aa)
Phosphate ABC transporter, inner membrane subunit PstC n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6ZV18_MELRP rbh
phosphate ABC transporter, inner membrane subunit PstC Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_56_15_curated
phosphate ABC transporter, inner membrane subunit PstC
SCNpilot_cont_300_bf_scaffold_1539_15
R_Gammaproteobacteria_56_15, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16890..17744
DNA (855bp) protein (285aa)
phosphate ABC transporter permease; K02038 phosphate transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_56_15_curated
Phosphate ABC transporter membrane protein 2, PhoT family id=1716406 bin=GWA2_Elusimicrobia_69_24 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
phosphate ABC transporter permease
SCNpilot_cont_300_bf_scaffold_1539_16
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

17737..18543
DNA (807bp) protein (269aa)
pstB; ABC phosphate uptake transporter, ATP-binding protein (EC:3.6.3.27) Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
pstB; phosphate transporter ATP-binding protein (EC:3.6.3.27)
Phosphate ABC transporter, ATP-binding protein n=1 Tax=Frankia sp. QA3 RepID=I9KM30_9ACTO
SCNpilot_cont_300_bf_scaffold_1539_17
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18592..19311
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI00037E5FDD
phoU; negative regulator ABC phosphate transport
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; S
SCNpilot_cont_300_bf_scaffold_1539_18
unknown

Not on your lists

comp(19390..19590)
DNA (201bp) protein (67aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1539_19
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19798..20169
DNA (372bp) protein (124aa)
Regulatory protein, ArsR n=1 Tax=Acidiphilium sp. PM RepID=F7SAG0_9PROT
Regulatory protein, ArsR {ECO:0000313|EMBL:EGO93780.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium s
regulatory protein ArsR
SCNpilot_cont_300_bf_scaffold_1539_20
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

20166..20669
DNA (504bp) protein (168aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Methylocystis sp. (strain SC2) RepID=J7QNC6_METSZ
Glyoxalase {ECO:0000313|EMBL:KIY09834.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
glyoxalase/bleomycin resistance protein/dioxygenase
SCNpilot_cont_300_bf_scaffold_1539_21
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20726..21190
DNA (465bp) protein (155aa)
arsenate reductase (EC:1.20.4.1)
Arsenate reductase {ECO:0000313|EMBL:BAJ83094.1}; EC=1.20.4.1 {ECO:0000313|EMBL:BAJ83094.1};; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; A
Arsenate reductase n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J7M7_ACIMA
SCNpilot_cont_300_bf_scaffold_1539_22
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21187..21630
DNA (444bp) protein (148aa)
arsenate reductase n=1 Tax=Amorphus coralli RepID=UPI0003778827
Arsenate reductase {ECO:0000313|EMBL:GAO22447.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.
arsE; arsenate reductase
SCNpilot_cont_300_bf_scaffold_1539_23
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21627..22706
DNA (1080bp) protein (360aa)
Arsenite efflux pump ACR3 n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5Z2F5_9PROT
Arsenical resistance protein {ECO:0000313|EMBL:GAN79036.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella a
arsenite efflux pump ACR3
SCNpilot_cont_300_bf_scaffold_1539_24
bacterium YEK0313, Bacteria

Not on your lists

23109..23783
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00037D7E22
HTH-type transcriptional regulator GltC {ECO:0000313|EMBL:CEJ16015.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
transcriptional regulator
SCNpilot_cont_300_bf_scaffold_1539_25
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23756..24013)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCZ4_PELHB
Uncharacterized protein {ECO:0000313|EMBL:ETR77818.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1539_26
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24025..25179)
DNA (1155bp) protein (385aa)
Conjugal transfer protein TrbI n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BHW6_9RHIZ
conjugal transfer protein TrbI
Conjugal transfer protein TrbI {ECO:0000313|EMBL:AGK59755.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrob
SCNpilot_cont_300_bf_scaffold_1539_27
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25176..26186)
DNA (1011bp) protein (337aa)
Conjugal transfer protein TrbG n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B4L0_9RHIZ
conjugal transfer protein TrbG
Conjugal transfer protein TrbG {ECO:0000313|EMBL:AGK57162.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrob
SCNpilot_cont_300_bf_scaffold_1539_28
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26183..26872)
DNA (690bp) protein (230aa)
UPI0003CF1D4B related cluster n=1 Tax=unknown RepID=UPI0003CF1D4B
Conjugal transfer protein TrbF {ECO:0000313|EMBL:ESY62548.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizob
type IV secretory pathway, TrbF component
SCNpilot_cont_300_bf_scaffold_1539_29
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26869..27024)
DNA (156bp) protein (52aa)
Conjugal transfer protein TrbL n=2 Tax=Oligotropha carboxidovorans RepID=B6JHP1_OLICO
trbL3; conjugal transfer protein TrbL
Conjugal transfer protein TrbL {ECO:0000313|EMBL:AEI06337.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha ca
Displaying 29 items

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