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SCNpilot_cont_300_bf_scaffold_1539_28

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_62_8

near complete RP 46 / 55 BSCG 46 / 51 MC: 2 ASCG 10 / 38
Location: comp(26183..26872)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CF1D4B related cluster n=1 Tax=unknown RepID=UPI0003CF1D4B similarity UNIREF
DB: UNIREF100
  • Identity: 79.3
  • Coverage: 227.0
  • Bit_score: 392
  • Evalue 2.60e-106
Conjugal transfer protein TrbF {ECO:0000313|EMBL:ESY62548.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizob similarity UNIPROT
DB: UniProtKB
  • Identity: 79.3
  • Coverage: 227.0
  • Bit_score: 392
  • Evalue 3.70e-106
type IV secretory pathway, TrbF component similarity KEGG
DB: KEGG
  • Identity: 78.9
  • Coverage: 227.0
  • Bit_score: 390
  • Evalue 2.80e-106

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Taxonomy

Mesorhizobium sp. LNHC252B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 690
ATGACGCTGTTTCGCCGCCCCGCCGTGCATTACGGCAAGACGCCCGAACCTGAGACGCCCTATCAGAAGGCGGCCCAGGTCTGGGACGAGCGCATCGGCTCGGCTCGCGTGCAGGCCCGCAACTGGCGTCTGATGGCGTTCGGCTGCCTCGCCTTGTCGGCGGGCCTGGCCGGCGGGCTGGTCTGGCAATCCGAACGCGGCGCCATCGTCCCGTGGGTGGTGCAGATCGATCCGCACGGACAGGCGCAGGCGATCGCTCCCGCCACCGCCGATTATCAACCCACCGATCCGCAGATCGCCTGGTATCTGGCGCGCTTCGTCGAAGAAGTCCGCTCGCTTCCGGACGATGCCATCGTCGTGCGCCAGAACTGGCTGCGCGCCTATGACTTCACCACCGAGCAGGGCGCGCTCGCACTCAATGATTATGCCCGCGCCAACGATCCGTTCAGCCGCGTAGGCAAAGAGCAGGTCGCGGTCGACATCTCCAGCGTCATCCGCGCCTCGCCCGACAGCTTCCGCGTCGCCTGGGTCGAGCGCCGCTACCAGGACGGCAGCCTCGCCGGCACCGCCCATTGGACCGCCATCCTCACCATCGTCCTCCAGCCGCCGCAGGACGCCGAGCGGCTGCGCAAAAATCCCCTCGGCGTCTACGTCACCGCCATCAACTGGTCGAAGGAGCTGGACCAATGA
PROTEIN sequence
Length: 230
MTLFRRPAVHYGKTPEPETPYQKAAQVWDERIGSARVQARNWRLMAFGCLALSAGLAGGLVWQSERGAIVPWVVQIDPHGQAQAIAPATADYQPTDPQIAWYLARFVEEVRSLPDDAIVVRQNWLRAYDFTTEQGALALNDYARANDPFSRVGKEQVAVDISSVIRASPDSFRVAWVERRYQDGSLAGTAHWTAILTIVLQPPQDAERLRKNPLGVYVTAINWSKELDQ*