ggKbase home page

SCNpilot_cont_300_bf_scaffold_3103

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_3103_1
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..203)
DNA (201bp) protein (67aa)
Putative uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QVB7_BREDI
Putative uncharacterized protein {ECO:0000313|EMBL:EGF96546.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevund
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3103_2
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(251..973)
DNA (723bp) protein (241aa)
Ribonuclease n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QVB6_BREDI rbh
Ribonuclease {ECO:0000313|EMBL:EGF96545.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC
ribonuclease T2
SCNpilot_cont_300_bf_scaffold_3103_3
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1067..1351
DNA (285bp) protein (95aa)
Putative uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QVB5_BREDI
Putative uncharacterized protein {ECO:0000313|EMBL:EGF96544.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevund
SCNpilot_cont_300_bf_scaffold_3103_4
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1406..2752)
DNA (1347bp) protein (449aa)
Tat twin-arginine translocation pathway signal sequence domain protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QVB4_BREDI rbh
Tat twin-arginine translocation pathway signal sequence domain protein {ECO:0000313|EMBL:EGF96543.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobactera
glycosyl hydrolase family 109
SCNpilot_cont_300_bf_scaffold_3103_5
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2822..3484)
DNA (663bp) protein (221aa)
Aspartate racemase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QVB3_BREDI rbh
Aspartate racemase {ECO:0000313|EMBL:EGF96542.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminut
aspartate racemase
SCNpilot_cont_300_bf_scaffold_3103_6
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3709..4161)
DNA (453bp) protein (151aa)
Acetyltransferase GNAT family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QVB2_BREDI rbh
Acetyltransferase GNAT family protein {ECO:0000313|EMBL:EGF96541.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Br
GNAT family acetyltransferase
SCNpilot_cont_300_bf_scaffold_3103_7
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4509..6281
DNA (1773bp) protein (591aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007809};; Hydroxymethylpyrimidi
Phosphomethylpyrimidine synthase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QMJ3_BREDI rbh
thiamine biosynthesis protein ThiC rbh
SCNpilot_cont_300_bf_scaffold_3103_8
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6415..7080
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Klebsiella pneumoniae MGH 40 RepID=V3LJK3_KLEPN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EER61521.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii
SCNpilot_cont_300_bf_scaffold_3103_9
Streptomyces coelicoflavus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7436..7942
DNA (507bp) protein (169aa)
Uncharacterized protein (Fragment) n=1 Tax=Streptomyces coelicoflavus ZG0656 RepID=H1QE89_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EHN77256.1}; Flags: Fragment;; TaxID=1120227 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces coel
Zeta toxin family protein
SCNpilot_cont_300_bf_scaffold_3103_10
unknown

Not on your lists

7939..8121
DNA (183bp) protein (61aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_3103_11
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8371..9198
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QLB3_BREDI rbh
Uncharacterized protein {ECO:0000313|EMBL:EKY28779.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas d
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3103_12
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9309..9980)
DNA (672bp) protein (224aa)
DsbA-like protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QLC3_BREDI rbh
DsbA-like protein {ECO:0000313|EMBL:EKY28778.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminut
DSBA oxidoreductase
SCNpilot_cont_300_bf_scaffold_3103_13
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10092..11027
DNA (936bp) protein (312aa)
Putative cytidine/uridine-specific hydrolase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QQT7_BREDI rbh
Putative cytidine/uridine-specific hydrolase {ECO:0000313|EMBL:EKY30065.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" so
inosine/uridine-preferring nucleoside hydrolase rbh
SCNpilot_cont_300_bf_scaffold_3103_14
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11024..11869
DNA (846bp) protein (282aa)
Putative ribokinase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QQ66_BREDI rbh
Putative ribokinase {ECO:0000313|EMBL:EKY30066.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas dimin
PfkB domain-containing protein
SCNpilot_cont_300_bf_scaffold_3103_15
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11880..12911)
DNA (1032bp) protein (344aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteri
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QPY6_BREDI rbh
Holliday junction DNA helicase RuvB
SCNpilot_cont_300_bf_scaffold_3103_16
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13081..13596)
DNA (516bp) protein (172aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QPZ0_BREDI
Holliday junction DNA helicase RuvA
SCNpilot_cont_300_bf_scaffold_3103_17
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13640..14152)
DNA (513bp) protein (171aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QVA9_BREDI rbh
SCNpilot_cont_300_bf_scaffold_3103_18
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14947..15648)
DNA (702bp) protein (234aa)
MgtC family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QVA7_BREDI rbh
MgtC family protein {ECO:0000313|EMBL:EGF96536.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminu
MgtC/SapB transporter
SCNpilot_cont_300_bf_scaffold_3103_19
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15641..16159)
DNA (519bp) protein (173aa)
Cation-binding protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QVA6_BREDI rbh
Cation-binding protein {ECO:0000313|EMBL:EGF96535.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas dim
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3103_20
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16268..16957)
DNA (690bp) protein (230aa)
Probable transcriptional regulatory protein BDIM_03390 n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QVA5_BREDI
Probable transcriptional regulatory protein BDIM_03390 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevun
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3103_21
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17084..17293
DNA (210bp) protein (70aa)
Putative uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QVA4_BREDI
Putative uncharacterized protein {ECO:0000313|EMBL:EGF96533.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevund
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3103_22
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17383..17739
DNA (357bp) protein (119aa)
Putative uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QVA3_BREDI
Putative uncharacterized protein {ECO:0000313|EMBL:EGF96532.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevund
SCNpilot_cont_300_bf_scaffold_3103_23
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17744..18208
DNA (465bp) protein (155aa)
Tol-pal system-associated acyl-CoA thioesterase {ECO:0000313|EMBL:EGF96531.1}; EC=3.1.2.- {ECO:0000313|EMBL:EGF96531.1};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobact
Tol-pal system-associated acyl-CoA thioesterase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QVA2_BREDI rbh
tol-pal system-associated acyl-CoA thioesterase
SCNpilot_cont_300_bf_scaffold_3103_24
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18332..19081
DNA (750bp) protein (250aa)
Protein TolQ n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QVA1_BREDI rbh
Protein TolQ {ECO:0000313|EMBL:EGF96530.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC
protein TolQ
SCNpilot_cont_300_bf_scaffold_3103_25
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19085..19549
DNA (465bp) protein (155aa)
Protein TolR n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QPZ3_BREDI
Protein TolR {ECO:0000313|EMBL:EKY30078.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470
protein TolR
SCNpilot_cont_300_bf_scaffold_3103_26
unknown

Not on your lists

comp(19450..19695)
DNA (246bp) protein (82aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_3103_27
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20130..20363
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QPZ2_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EKY30079.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas d
SCNpilot_cont_300_bf_scaffold_3103_28
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20482..21864
DNA (1383bp) protein (461aa)
Protein TolB n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QVA0_BREDI rbh
Protein TolB {ECO:0000256|HAMAP-Rule:MF_00671}; Flags: Precursor;; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brev
Tol-Pal system beta propeller repeat protein TolB
SCNpilot_cont_300_bf_scaffold_3103_29
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22017..22571
DNA (555bp) protein (185aa)
Peptidoglycan-associated lipoprotein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QV99_BREDI rbh
Peptidoglycan-associated lipoprotein {ECO:0000313|EMBL:EGF96528.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Bre
peptidoglycan-associated lipoprotein
SCNpilot_cont_300_bf_scaffold_3103_30
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22681..23583
DNA (903bp) protein (301aa)
Putative uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QV98_BREDI rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EGF96527.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevund
zinc ribbon domain protein
Displaying items 1-30 of 32 in total

View Taxonomy