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SCNpilot_cont_300_bf_scaffold_1310

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1310_1
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..2193)
DNA (2193bp) protein (731aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HA
ATP-dependent protease La (EC:3.4.21.53)
Lon protease n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R159_BREDI rbh
SCNpilot_cont_300_bf_scaffold_1310_2
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2468..3736)
DNA (1269bp) protein (423aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0Q6_BREDI rbh
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacteral
ATP-dependent Clp protease ATP-binding subunit ClpX
SCNpilot_cont_300_bf_scaffold_1310_3
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3933..4580
DNA (648bp) protein (216aa)
HAD hydrolase, family IB n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QPY0_BREDI rbh
HAD hydrolase, family IB {ECO:0000313|EMBL:EKY29971.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas
HAD superfamily hydrolase
SCNpilot_cont_300_bf_scaffold_1310_4
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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4775..5662
DNA (888bp) protein (296aa)
Membrane protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0Q5_BREDI rbh
Membrane protein {ECO:0000313|EMBL:EGF94184.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta
hypothetical membrane protein
SCNpilot_cont_300_bf_scaffold_1310_5
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5672..6406)
DNA (735bp) protein (245aa)
Bacterial regulatory protein, gntR family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0Q4_BREDI rbh
Bacterial regulatory protein, gntR family protein {ECO:0000313|EMBL:EGF94183.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;
GntR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_1310_6
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6442..7440)
DNA (999bp) protein (333aa)
Proline racemase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0Q3_BREDI rbh
Proline racemase {ECO:0000313|EMBL:EGF94182.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta
hydroxyproline-2-epimerase
SCNpilot_cont_300_bf_scaffold_1310_7
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7453..8382)
DNA (930bp) protein (310aa)
Dihydrodipicolinate synthase {ECO:0000313|EMBL:EGF94181.1}; EC=4.2.1.52 {ECO:0000313|EMBL:EGF94181.1};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacte
dihydrodipicolinate synthase protein (EC:4.3.3.7)
Dihydrodipicolinate synthase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0Q2_BREDI rbh
SCNpilot_cont_300_bf_scaffold_1310_8
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8456..9895)
DNA (1440bp) protein (480aa)
Aldehyde dehydrogenase, thermostable {ECO:0000313|EMBL:EGF94180.1}; EC=1.2.1.3 {ECO:0000313|EMBL:EGF94180.1};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Cau
Aldehyde dehydrogenase, thermostable n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0Q1_BREDI rbh
aldehyde dehydrogenase
SCNpilot_cont_300_bf_scaffold_1310_9
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9945..10973)
DNA (1029bp) protein (343aa)
malate dehydrogenase (EC:1.1.1.37)
Malate/L-lactate dehydrogenase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QRZ5_BREDI rbh
Malate/L-lactate dehydrogenase {ECO:0000313|EMBL:EKY30779.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundi
SCNpilot_cont_300_bf_scaffold_1310_10
unknown

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11075..11200
DNA (126bp) protein (42aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1310_11
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11234..11968)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0P7_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF94176.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas di
SCNpilot_cont_300_bf_scaffold_1310_12
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12063..12734)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0P5_BREDI rbh
Uncharacterized protein {ECO:0000313|EMBL:EGF94174.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas di
SCNpilot_cont_300_bf_scaffold_1310_13
Sphingomonas sp. ATCC 31555, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12823..13221)
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0003151981
SCNpilot_cont_300_bf_scaffold_1310_14
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13218..14402)
DNA (1185bp) protein (395aa)
type III secretion protein n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B4CD08 rbh
Translocation protein in type III secretion {ECO:0000313|EMBL:EGJ10479.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoat
hscU; translocation protein in type III secretion
SCNpilot_cont_300_bf_scaffold_1310_15
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14648..15388
DNA (741bp) protein (247aa)
slt; peptidoglycan N-acetylmuramoylhydrolase (EC:3.2.1.17); K01185 lysozyme [EC:3.2.1.17] Tax=GWA2_Burkholderiales_64_37_curated
Soluble lytic murein transglycosylase-like protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WLU5_9BURK
lytic transglycosylase catalytic subunit
SCNpilot_cont_300_bf_scaffold_1310_16
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15441..17465
DNA (2025bp) protein (675aa)
Type III secretory pathway, component EscV n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WLU4_9BURK rbh
Type III secretory pathway, component EscV {ECO:0000313|EMBL:EHR71430.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderia
hscV; type III secretory pathway protein
SCNpilot_cont_300_bf_scaffold_1310_17
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17481..19022
DNA (1542bp) protein (514aa)
Type III secretion outer membrane pore, YscC/HrcC family n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WLU3_9BURK rbh
Type III secretion outer membrane pore, YscC/HrcC family {ECO:0000313|EMBL:EHR71429.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source
sctC; type III secretion system protein SctC
Displaying 17 items

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