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SCNpilot_cont_300_bf_scaffold_2563

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2563_1
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..1383
DNA (1383bp) protein (461aa)
Putative ATP-dependent RNA helicase rhlE n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1C1_BREDI rbh
Putative ATP-dependent RNA helicase rhlE {ECO:0000313|EMBL:EGF94248.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source=
DEAD/DEAH box helicase
SCNpilot_cont_300_bf_scaffold_2563_2
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1538..2524
DNA (987bp) protein (329aa)
Diguanylate cyclase GGDEF domain protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1C0_BREDI rbh
Diguanylate cyclase GGDEF domain protein {ECO:0000313|EMBL:EGF94247.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source=
diguanylate cyclase
SCNpilot_cont_300_bf_scaffold_2563_3
unknown

Not on your lists

comp(3146..3937)
DNA (792bp) protein (264aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2563_4
unknown

Not on your lists

4186..4455
DNA (270bp) protein (90aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2563_5
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4599..4748)
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1B8_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF94245.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas di
SCNpilot_cont_300_bf_scaffold_2563_6
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4819..6471)
DNA (1653bp) protein (551aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_0
CTP synthase (EC:6.3.4.2)
CTP synthase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1B7_BREDI rbh
SCNpilot_cont_300_bf_scaffold_2563_7
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6596..7012)
DNA (417bp) protein (139aa)
Preprotein translocase, SecG subunit n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1B6_BREDI
Preprotein translocase, SecG subunit {ECO:0000313|EMBL:EGF94243.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Bre
preprotein translocase subunit SecG
SCNpilot_cont_300_bf_scaffold_2563_8
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7090..7260)
DNA (171bp) protein (57aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleB
triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1B5_BREDI
SCNpilot_cont_300_bf_scaffold_2563_9
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7914..9824
DNA (1911bp) protein (637aa)
Rotamase family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1B4_BREDI rbh
Rotamase family protein {ECO:0000313|EMBL:EGF94241.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas di
rotamase family protein rbh
SCNpilot_cont_300_bf_scaffold_2563_10
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9824..11347
DNA (1524bp) protein (508aa)
Anthranilate synthase component I {ECO:0000313|EMBL:EGF94240.1}; EC=4.1.3.27 {ECO:0000313|EMBL:EGF94240.1};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulo
anthranilate synthase component I (EC:4.1.3.27)
Anthranilate synthase component I n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1B3_BREDI rbh
SCNpilot_cont_300_bf_scaffold_2563_11
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11659..12249
DNA (591bp) protein (197aa)
Anthranilate synthase component 2 {ECO:0000313|EMBL:EGF94238.1}; EC=4.1.3.27 {ECO:0000313|EMBL:EGF94238.1};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulo
Anthranilate synthase component 2 n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1B1_BREDI rbh
glutamine amidotransferase rbh
SCNpilot_cont_300_bf_scaffold_2563_12
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12249..13283
DNA (1035bp) protein (345aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; TaxID=751586 spe
Anthranilate phosphoribosyltransferase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1B0_BREDI rbh
anthranilate phosphoribosyltransferase
SCNpilot_cont_300_bf_scaffold_2563_13
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13283..14086
DNA (804bp) protein (268aa)
Indole-3-glycerol phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046689}; Short=IGPS {ECO:0000256|HAMAP-Rule:MF_00134};; EC=4.1.1.48 {ECO:0000256|HAMAP-Rule:MF_00134, ECO:
Indole-3-glycerol phosphate synthase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1A9_BREDI rbh
trpC; indole-3-glycerol phosphate synthase
SCNpilot_cont_300_bf_scaffold_2563_14
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14126..15292)
DNA (1167bp) protein (389aa)
Lipid-A-disaccharide synthase {ECO:0000313|EMBL:EGF94235.1}; EC=2.4.1.182 {ECO:0000313|EMBL:EGF94235.1};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobac
Lipid-A-disaccharide synthase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1A8_BREDI rbh
lipid-A-disaccharide synthase
SCNpilot_cont_300_bf_scaffold_2563_15
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15374..16081)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QNQ2_BREDI rbh
Uncharacterized protein {ECO:0000313|EMBL:EKY29310.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas d
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2563_16
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16078..16866)
DNA (789bp) protein (263aa)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|SAAS:SAAS00064156}; EC=2.3.1.129 {ECO:0000256|SAAS:SAAS00001267};; TaxID=751586 species="Bacteria; Proteobacteria; A
acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase (EC:2.3.1.129)
Acyl-acyl-carrier-protein-UDP-N-acetylglucosamine O-acyltransferase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1A6_BREDI rbh
SCNpilot_cont_300_bf_scaffold_2563_17
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16863..17327)
DNA (465bp) protein (155aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064862};; (
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QMX1_BREDI rbh
beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ
SCNpilot_cont_300_bf_scaffold_2563_18
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17324..18250)
DNA (927bp) protein (309aa)
UDP-3-O-acylglucosamine N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00523}; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_00523};; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulob
UDP-3-O-acylglucosamine N-acyltransferase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QP33_BREDI rbh
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase
SCNpilot_cont_300_bf_scaffold_2563_19
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18259..18783)
DNA (525bp) protein (175aa)
Outer membrane protein OmpH-like family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1A2_BREDI rbh
Outer membrane protein OmpH-like family protein {ECO:0000313|EMBL:EGF94229.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;"
outer membrane chaperone Skp
SCNpilot_cont_300_bf_scaffold_2563_20
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18818..20962)
DNA (2145bp) protein (715aa)
Outer membrane protein assembly factor BamA n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1A1_BREDI rbh
Outer membrane protein assembly factor BamA {ECO:0000256|HAMAP-Rule:MF_01430, ECO:0000256|SAAS:SAAS00011174}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caul
outer membrane protein assembly complex, YaeT protein
SCNpilot_cont_300_bf_scaffold_2563_21
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21242..22459)
DNA (1218bp) protein (406aa)
RIP metalloprotease RseP n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QMU6_BREDI rbh
RIP metalloprotease RseP {ECO:0000313|EMBL:EKY29304.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas
membrane-associated zinc metalloprotease rbh
SCNpilot_cont_300_bf_scaffold_2563_22
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22483..23169)
DNA (687bp) protein (229aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:00002
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1A0_BREDI
SCNpilot_cont_300_bf_scaffold_2563_23
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23611..24429)
DNA (819bp) protein (273aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales;
Phosphatidate cytidylyltransferase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R199_BREDI rbh
phosphatidate cytidylyltransferase rbh
SCNpilot_cont_300_bf_scaffold_2563_24
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24431..25189)
DNA (759bp) protein (253aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacte
Isoprenyl transferase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R198_BREDI rbh
undecaprenyl diphosphate synthase
SCNpilot_cont_300_bf_scaffold_2563_25
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25224..25400)
DNA (177bp) protein (59aa)
Ribosome-recycling factor n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R197_BREDI
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=751586 species="Bacteria;
ribosome recycling factor
SCNpilot_cont_300_bf_scaffold_2563_26
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25466..25753)
DNA (288bp) protein (96aa)
Ribosome-recycling factor n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R197_BREDI
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=751586 species="Bacteria;
ribosome recycling factor
SCNpilot_cont_300_bf_scaffold_2563_27
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25794..26309)
DNA (516bp) protein (172aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197
uridylate kinase (EC:2.7.4.22)
Uridylate kinase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R196_BREDI
Displaying 27 items

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