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SCNpilot_cont_300_bf_scaffold_5348

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_5348_1
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..491)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. L103C120A0 RepID=V7HSK3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFL26907.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
putative membrane protein
SCNpilot_cont_300_bf_scaffold_5348_2
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(665..916)
DNA (252bp) protein (84aa)
Error-prone DNA polymerase {ECO:0000256|HAMAP-Rule:MF_01902}; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01902};; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphin
dnaE; DNA polymerase III alpha subunit (EC:2.7.7.7)
Error-prone DNA polymerase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QHS3_BREDI
SCNpilot_cont_300_bf_scaffold_5348_3
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(991..1734)
DNA (744bp) protein (248aa)
Transposase n=1 Tax=Asticcacaulis sp. AC466 RepID=V4NWG5_9CAUL rbh
Transposase {ECO:0000313|EMBL:EXS68061.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. Ant17.;"
putative transposase for insertion sequence element
SCNpilot_cont_300_bf_scaffold_5348_4
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1731..2033)
DNA (303bp) protein (101aa)
transposase n=1 Tax=Gluconacetobacter europaeus RepID=UPI00031847F9
Transposase {ECO:0000313|EMBL:EXS68061.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. Ant17.;"
putative transposase for insertion sequence element
SCNpilot_cont_300_bf_scaffold_5348_5
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2059..2532)
DNA (474bp) protein (158aa)
Error-prone DNA polymerase {ECO:0000256|HAMAP-Rule:MF_01902}; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01902};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobact
dnaE; DNA polymerase III alpha subunit (EC:2.7.7.7)
Error-prone DNA polymerase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QHS3_BREDI
SCNpilot_cont_300_bf_scaffold_5348_6
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2490..5117)
DNA (2628bp) protein (876aa)
Error-prone DNA polymerase {ECO:0000256|HAMAP-Rule:MF_01902}; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01902};; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphin
dnaE; DNA polymerase III alpha subunit (EC:2.7.7.7)
Error-prone DNA polymerase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QHS3_BREDI
SCNpilot_cont_300_bf_scaffold_5348_7
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5114..6634)
DNA (1521bp) protein (507aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QIR3_BREDI rbh
Nucleotidyltransferase {ECO:0000313|EMBL:KEQ52189.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chloro
putative nucleotidyltransferase
SCNpilot_cont_300_bf_scaffold_5348_8
Mycobacterium avium, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7378..8286
DNA (909bp) protein (303aa)
Helicase conserved C-terminal domain protein {ECO:0000313|EMBL:EUA41955.1}; TaxID=1299330 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium com
Putative helicase id=4972246 bin=GWA2_OP3_52_12 species=Pseudomonas aeruginosa genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
type III restriction protein res subunit
Displaying 8 items

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