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SCNpilot_cont_300_bf_scaffold_1064

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1064_1
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..379
DNA (378bp) protein (126aa)
Phenylacetic acid degradation-related protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QKK1_NITHX
phenylacetic acid degradation-related protein
Phenylacetic acid degradation-related protein {ECO:0000313|EMBL:ABE63246.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source=
SCNpilot_cont_300_bf_scaffold_1064_2
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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533..997
DNA (465bp) protein (155aa)
50S ribosomal protein L13 n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WYZ8_9BRAD rbh
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083943}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitroba
rplM; 50S ribosomal protein L13
SCNpilot_cont_300_bf_scaffold_1064_3
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1000..1476
DNA (477bp) protein (159aa)
30S ribosomal protein S9 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=RS9_NITHX rbh
rpsI; 30S ribosomal protein S9 rbh
30S ribosomal protein S9 {ECO:0000255|HAMAP-Rule:MF_00532}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamb
SCNpilot_cont_300_bf_scaffold_1064_4
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1642..2583
DNA (942bp) protein (314aa)
Lytic transglycosylase, catalytic n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QKK4_NITHX rbh
lytic transglycosylase, catalytic rbh
Lytic transglycosylase, catalytic {ECO:0000313|EMBL:ABE63243.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;"
SCNpilot_cont_300_bf_scaffold_1064_5
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2699..3190
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QKK5_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE63242.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgen
SCNpilot_cont_300_bf_scaffold_1064_6
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3308..4561)
DNA (1254bp) protein (418aa)
Major facilitator superfamily protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WYZ1_9BRAD rbh
Major facilitator superfamily protein {ECO:0000313|EMBL:EAQ34794.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitroba
major facilitator transporter rbh
SCNpilot_cont_300_bf_scaffold_1064_7
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4878..5960)
DNA (1083bp) protein (361aa)
Heme A synthase {ECO:0000255|HAMAP-Rule:MF_01665}; Short=HAS {ECO:0000255|HAMAP-Rule:MF_01665};; EC=1.3.-.- {ECO:0000255|HAMAP-Rule:MF_01665};; Cytochrome aa3-controlling protein {ECO:0000255|HAMAP-Ru
Heme A synthase n=2 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=CTAA_NITHX rbh
cytochrome oxidase assembly rbh
SCNpilot_cont_300_bf_scaffold_1064_8
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6058..6264
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QKJ6_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE63251.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Ni
SCNpilot_cont_300_bf_scaffold_1064_9
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6415..7614
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QKJ5_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE63252.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgen
SCNpilot_cont_300_bf_scaffold_1064_10
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7639..9780)
DNA (2142bp) protein (714aa)
Lipopolysaccharide biosynthesis n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QKJ4_NITHX
Lipopolysaccharide biosynthesis {ECO:0000313|EMBL:ABE63253.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter h
lipopolysaccharide biosynthesis protein
SCNpilot_cont_300_bf_scaffold_1064_11
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10008..10709
DNA (702bp) protein (234aa)
Polysaccharide export protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QKJ3_NITHX rbh
polysaccharide export protein rbh
Polysaccharide export protein {ECO:0000313|EMBL:ABE63254.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" sour
SCNpilot_cont_300_bf_scaffold_1064_12
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10716..11846
DNA (1131bp) protein (377aa)
Glycosyl transferase, group 1 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QKJ2_NITHX
group 1 glycosyl transferase
Glycosyl transferase, group 1 {ECO:0000313|EMBL:ABE63255.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter ham
SCNpilot_cont_300_bf_scaffold_1064_13
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11959..13491
DNA (1533bp) protein (511aa)
Sugar transferase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QKJ1_NITHX rbh
sugar transferase rbh
Sugar transferase {ECO:0000313|EMBL:ABE63256.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (s
SCNpilot_cont_300_bf_scaffold_1064_14
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13525..14790
DNA (1266bp) protein (422aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QKJ0_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE63257.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgen
SCNpilot_cont_300_bf_scaffold_1064_15
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14806..15984)
DNA (1179bp) protein (393aa)
Saccharopine dehydrogenase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QKI9_NITHX
saccharopine dehydrogenase
Saccharopine dehydrogenase {ECO:0000313|EMBL:ABE63258.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hambur
SCNpilot_cont_300_bf_scaffold_1064_16
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16001..16276)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QP08_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE62039.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgen
SCNpilot_cont_300_bf_scaffold_1064_17
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16720..17346)
DNA (627bp) protein (209aa)
Transcriptional regulator, MerR family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMY8_NITHX rbh
MerR family transcriptional regulator rbh
Transcriptional regulator, MerR family {ECO:0000313|EMBL:ABE62409.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrob
SCNpilot_cont_300_bf_scaffold_1064_18
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17673..18005)
DNA (333bp) protein (111aa)
Integration host factor subunit alpha n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=IHFA_NITHX
ihfA; integration host factor subunit alpha
Integration host factor subunit alpha {ECO:0000255|HAMAP-Rule:MF_00380}; Short=IHF-alpha {ECO:0000255|HAMAP-Rule:MF_00380};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizob
SCNpilot_cont_300_bf_scaffold_1064_19
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18135..19112)
DNA (978bp) protein (326aa)
3-oxoacyl-ACP synthase (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMZ0_NITHX rbh
SCNpilot_cont_300_bf_scaffold_1064_20
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19109..20170)
DNA (1062bp) protein (354aa)
Phosphate acyltransferase {ECO:0000255|HAMAP-Rule:MF_00019}; EC=2.3.1.n2 {ECO:0000255|HAMAP-Rule:MF_00019};; Acyl-ACP phosphotransacylase {ECO:0000255|HAMAP-Rule:MF_00019}; Acyl-[acyl-carrier-protein]
Phosphate acyltransferase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=PLSX_NITHX rbh
glycerol-3-phosphate acyltransferase PlsX rbh
SCNpilot_cont_300_bf_scaffold_1064_21
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20406..20996)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMZ2_NITHX rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE62405.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgen
SCNpilot_cont_300_bf_scaffold_1064_22
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(21008..21598)
DNA (591bp) protein (197aa)
Ubiquinol-cytochrome C chaperone n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SSS6_NITWN
ubiquinol-cytochrome C chaperone
Ubiquinol-cytochrome C chaperone {ECO:0000313|EMBL:ABA04665.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter
SCNpilot_cont_300_bf_scaffold_1064_23
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21698..22171
DNA (474bp) protein (158aa)
SmpA/OmlA n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WYV4_9BRAD
SmpA/OmlA {ECO:0000313|EMBL:EAQ34833.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
SmpA/OmlA protein
SCNpilot_cont_300_bf_scaffold_1064_24
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22183..23715)
DNA (1533bp) protein (511aa)
Propionyl-CoA carboxylase carboxyltransferase subunit n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMZ7_NITHX rbh
carboxyl transferase rbh
Propionyl-CoA carboxylase carboxyltransferase subunit {ECO:0000313|EMBL:ABE62400.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;"
SCNpilot_cont_300_bf_scaffold_1064_25
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23990..24256)
DNA (267bp) protein (89aa)
Type III secretion protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMZ8_NITHX
type III secretion protein
Type III secretion protein {ECO:0000313|EMBL:ABE62399.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hambur
SCNpilot_cont_300_bf_scaffold_1064_26
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24253..25965)
DNA (1713bp) protein (571aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMZ9_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE62398.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgen
SCNpilot_cont_300_bf_scaffold_1064_27
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26015..26800)
DNA (786bp) protein (262aa)
ATP12 ATPase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QN00_NITHX rbh
ATP12 ATPase rbh
ATP12 ATPase {ECO:0000313|EMBL:ABE62397.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain
SCNpilot_cont_300_bf_scaffold_1064_28
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26850..28085)
DNA (1236bp) protein (412aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiacea
Pseudouridine synthase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QN01_NITHX
pseudouridine synthase RluD
SCNpilot_cont_300_bf_scaffold_1064_29
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28180..30129)
DNA (1950bp) protein (650aa)
Recombination protein MgsA n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QN03_NITHX
recombination factor protein RarA
Recombination protein MgsA {ECO:0000313|EMBL:ABE62394.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hambur
SCNpilot_cont_300_bf_scaffold_1064_30
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30126..31031)
DNA (906bp) protein (302aa)
Peptidase S1C, Do n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QN04_NITHX
peptidase S1C, Do
Peptidase S1C, Do {ECO:0000313|EMBL:ABE62393.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobac
Displaying 30 items

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