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SCNpilot_cont_300_bf_scaffold_543

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_543_1
unknown

Not on your lists

comp(2..136)
DNA (135bp) protein (45aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_543_2
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(260..2185)
DNA (1926bp) protein (642aa)
Aspartyl-tRNA synthetase / asparaginyl-tRNA synthetase (Aspartate-/asparagine-tRNA ligase) (AspRS) {ECO:0000313|EMBL:CCD94113.1}; EC=6.1.1.12 {ECO:0000313|EMBL:CCD94113.1};; EC=6.1.1.22 {ECO:0000313|E
Aspartate--tRNA ligase n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SIT6_9BRAD rbh
aspS; aspartyl-tRNA synthetase
SCNpilot_cont_300_bf_scaffold_543_3
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2405..3553
DNA (1149bp) protein (383aa)
Ribonuclease D {ECO:0000255|HAMAP-Rule:MF_01899}; Short=RNase D {ECO:0000255|HAMAP-Rule:MF_01899};; EC=3.1.13.5 {ECO:0000255|HAMAP-Rule:MF_01899};; TaxID=323097 species="Bacteria; Proteobacteria; Alph
Ribonuclease D n=2 Tax=Nitrobacter hamburgensis RepID=RND_NITHX
ribonuclease D
SCNpilot_cont_300_bf_scaffold_543_4
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3564..4223)
DNA (660bp) protein (220aa)
Ubiquinol-cytochrome c reductase iron-sulfur subunit {ECO:0000256|RuleBase:RU004494}; EC=1.10.2.2 {ECO:0000256|RuleBase:RU004494};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria;
Ubiquinol-cytochrome c reductase iron-sulfur subunit n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLI7_NITHX rbh
ubiquinol-cytochrome c reductase, iron-sulfur subunit rbh
SCNpilot_cont_300_bf_scaffold_543_5
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4367..5872)
DNA (1506bp) protein (502aa)
Ppx/GppA phosphatase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLI6_NITHX
Ppx/GppA phosphatase rbh
Ppx/GppA phosphatase {ECO:0000313|EMBL:ABE62911.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis
SCNpilot_cont_300_bf_scaffold_543_6
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5880..8081)
DNA (2202bp) protein (734aa)
polyphosphate kinase (EC:2.7.4.1) rbh
Polyphosphate kinase {ECO:0000255|HAMAP-Rule:MF_00347}; EC=2.7.4.1 {ECO:0000255|HAMAP-Rule:MF_00347};; ATP-polyphosphate phosphotransferase {ECO:0000255|HAMAP-Rule:MF_00347}; Polyphosphoric acid kinas
Polyphosphate kinase n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=PPK_NITWN
SCNpilot_cont_300_bf_scaffold_543_7
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8239..8919)
DNA (681bp) protein (227aa)
Regulatory inactivation of DnaA Hda protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLI4_NITHX rbh
hypothetical protein
Regulatory inactivation of DnaA Hda protein {ECO:0000313|EMBL:ABE62913.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="N
SCNpilot_cont_300_bf_scaffold_543_8
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8962..9504)
DNA (543bp) protein (181aa)
CDP-alcohol phosphatidyltransferase (EC:2.7.8.5)
CDP-alcohol phosphatidyltransferase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X1K5_9BRAD rbh
CDP-alcohol phosphatidyltransferase {ECO:0000313|EMBL:EAQ33884.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobact
SCNpilot_cont_300_bf_scaffold_543_9
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9676..10749
DNA (1074bp) protein (358aa)
phosphoribosylaminoimidazole synthetase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000255|HAMAP-Rule:MF_00741}; EC=6.3.3.1 {ECO:0000255|HAMAP-Rule:MF_00741};; AIR synthase {ECO:0000255|HAMAP-Rule:MF_00741}; AIRS {ECO:0000255|HAMAP
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=PUR5_NITHX rbh
SCNpilot_cont_300_bf_scaffold_543_10
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10772..11425
DNA (654bp) protein (218aa)
phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_019
Formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SS82_NITWN
SCNpilot_cont_300_bf_scaffold_543_11
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11511..11714)
DNA (204bp) protein (68aa)
Cold-shock DNA-binding domain protein n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VDN1_RHOPX
cold-shock DNA-binding domain-containing protein
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:ADU43965.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rh
SCNpilot_cont_300_bf_scaffold_543_12
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12175..12939)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLH9_NITHX rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE62918.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgen
SCNpilot_cont_300_bf_scaffold_543_13
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12966..13388)
DNA (423bp) protein (141aa)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000256|HAMAP-Rule:M
ndk; nucleoside diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X1K1_9BRAD
SCNpilot_cont_300_bf_scaffold_543_14
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13630..13977
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLH7_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE62920.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgen
SCNpilot_cont_300_bf_scaffold_543_15
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14124..15272)
DNA (1149bp) protein (383aa)
Carbamoyl-phosphate synthase L chain, ATP-binding protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLH6_NITHX
carbamoyl-phosphate synthase subunit L
Carbamoyl-phosphate synthase L chain, ATP-binding protein {ECO:0000313|EMBL:ABE62921.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacte
SCNpilot_cont_300_bf_scaffold_543_16
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15236..16057)
DNA (822bp) protein (274aa)
Carbamoyl-phosphate synthase L chain, ATP-binding protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLH6_NITHX
carbamoyl-phosphate synthase subunit L
Carbamoyl-phosphate synthase L chain, ATP-binding protein {ECO:0000313|EMBL:ABE62921.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacte
SCNpilot_cont_300_bf_scaffold_543_17
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16060..17607)
DNA (1548bp) protein (516aa)
propionyl-CoA carboxylase (EC:6.4.1.3)
Propionyl-CoA carboxylase {ECO:0000313|EMBL:ABE62922.1}; EC=6.4.1.3 {ECO:0000313|EMBL:ABE62922.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae;
Propionyl-CoA carboxylase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLH5_NITHX rbh
SCNpilot_cont_300_bf_scaffold_543_18
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17877..18044)
DNA (168bp) protein (56aa)
ETC complex I subunit conserved region protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X1J6_9BRAD
ETC complex I subunit conserved region protein {ECO:0000313|EMBL:EAQ33892.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source
ETC complex I subunit region
SCNpilot_cont_300_bf_scaffold_543_19
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18629..18889)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X0E6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ34288.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-31
hypothetical protein
SCNpilot_cont_300_bf_scaffold_543_20
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19447..19755)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLG6_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE62931.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgen
SCNpilot_cont_300_bf_scaffold_543_21
Methylocystis rosea, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20198..20533
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Methylocystis rosea RepID=UPI0003632E10
SCNpilot_cont_300_bf_scaffold_543_22
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20809..20937
DNA (129bp) protein (43aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X1L8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ33873.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-31
SCNpilot_cont_300_bf_scaffold_543_23
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21271..21735
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLR1_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE62836.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgen
SCNpilot_cont_300_bf_scaffold_543_24
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21931..22719
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X1L4_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EAQ33875.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-31
hypothetical protein
SCNpilot_cont_300_bf_scaffold_543_25
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22787..23197)
DNA (411bp) protein (137aa)
Cupin region protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WZ36_9BRAD
Cupin region protein {ECO:0000313|EMBL:EAQ34757.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.
cupin
SCNpilot_cont_300_bf_scaffold_543_26
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23373..24104
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLQ9_NITHX rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABE62838.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgen
SCNpilot_cont_300_bf_scaffold_543_27
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24101..25111
DNA (1011bp) protein (337aa)
Allophanate hydrolase subunit 2 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLQ8_NITHX
allophanate hydrolase subunit 2
Allophanate hydrolase subunit 2 {ECO:0000313|EMBL:ABE62839.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter h
SCNpilot_cont_300_bf_scaffold_543_28
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25171..25938
DNA (768bp) protein (256aa)
UPF0271 protein Nham_2042 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Y2042_NITHX rbh
LamB/YcsF family protein rbh
UPF0271 protein Nham_2042 {ECO:0000255|HAMAP-Rule:MF_00691}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter ham
SCNpilot_cont_300_bf_scaffold_543_29
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25949..26101)
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WZ25_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ34761.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-31
SCNpilot_cont_300_bf_scaffold_543_30
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26271..27248)
DNA (978bp) protein (326aa)
Alcohol dehydrogenase, zinc-binding protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLQ5_NITHX
zinc-binding alcohol dehydrogenase
Alcohol dehydrogenase, zinc-binding protein {ECO:0000313|EMBL:ABE62842.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="N
Displaying items 1-30 of 63 in total

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