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SCNpilot_cont_300_bf_scaffold_662

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_662_1
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..2304
DNA (2304bp) protein (768aa)
Acriflavin resistance protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHF9_NITHX
acriflavin resistance protein
Acriflavin resistance protein {ECO:0000313|EMBL:ABE64338.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter ham
SCNpilot_cont_300_bf_scaffold_662_2
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2313..2987)
DNA (675bp) protein (225aa)
Transcriptional regulatory protein, Crp family protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X0E1_9BRAD
Transcriptional regulatory protein, Crp family protein {ECO:0000313|EMBL:EAQ34294.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;
Crp/Fnr family transcriptional regulator rbh
SCNpilot_cont_300_bf_scaffold_662_3
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3076..3690)
DNA (615bp) protein (205aa)
Pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SN57_NITWN rbh
pyridoxamine 5'-phosphate oxidase-like FMN-binding protein rbh
Pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein {ECO:0000313|EMBL:ABA06284.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitro
SCNpilot_cont_300_bf_scaffold_662_4
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3787..5523)
DNA (1737bp) protein (579aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHG2_NITHX rbh
Uncharacterized protein {ECO:0000313|EMBL:ABE64335.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgen
hypothetical protein rbh
SCNpilot_cont_300_bf_scaffold_662_5
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5921..6802
DNA (882bp) protein (294aa)
Peptidase C14, caspase catalytic subunit p20 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHG3_NITHX rbh
peptidase C14, caspase catalytic subunit p20 rbh
Peptidase C14, caspase catalytic subunit p20 {ECO:0000313|EMBL:ABE64334.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitr
SCNpilot_cont_300_bf_scaffold_662_6
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6809..7711)
DNA (903bp) protein (301aa)
Secretion protein HlyD n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHG4_NITHX
secretion protein HlyD
Secretion protein HlyD {ECO:0000313|EMBL:ABE64333.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nit
SCNpilot_cont_300_bf_scaffold_662_7
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7812..10229)
DNA (2418bp) protein (806aa)
adenylyl cyclase (EC:4.6.1.1)
Adenylyl cyclase class-3/4/guanylyl cyclase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X0F6_9BRAD
Adenylyl cyclase class-3/4/guanylyl cyclase {ECO:0000313|EMBL:EAQ34287.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="N
SCNpilot_cont_300_bf_scaffold_662_8
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10287..10643)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QGE5_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE64702.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Ni
SCNpilot_cont_300_bf_scaffold_662_9
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10964..12052
DNA (1089bp) protein (363aa)
Response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QGE6_NITHX
response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase
Response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase {ECO:0000313|EMBL:ABE64701.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brad
SCNpilot_cont_300_bf_scaffold_662_10
unknown

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comp(12332..12697)
DNA (366bp) protein (122aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_662_11
unknown

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12842..12949
DNA (108bp) protein (36aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_662_12
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12985..13260
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QH42_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE64455.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgen
SCNpilot_cont_300_bf_scaffold_662_13
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13823..14773
DNA (951bp) protein (317aa)
Transport system permease protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QH43_NITHX
transport system permease
Transport system permease protein {ECO:0000313|EMBL:ABE64454.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter
SCNpilot_cont_300_bf_scaffold_662_14
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14770..15552
DNA (783bp) protein (261aa)
ABC transporter related protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QH44_NITHX rbh
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ABE64453.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter h
SCNpilot_cont_300_bf_scaffold_662_15
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15537..16448
DNA (912bp) protein (304aa)
Periplasmic binding protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QH45_NITHX
periplasmic binding protein
Periplasmic binding protein {ECO:0000313|EMBL:ABE64452.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source
SCNpilot_cont_300_bf_scaffold_662_16
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16635..16949)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QGE3_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE64704.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgen
SCNpilot_cont_300_bf_scaffold_662_17
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


17301..17567
DNA (267bp) protein (89aa)
30S ribosomal protein S20 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=RS20_NITHX
rpsT; 30S ribosomal protein S20
30S ribosomal protein S20 {ECO:0000255|HAMAP-Rule:MF_00500}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter ham
SCNpilot_cont_300_bf_scaffold_662_18
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18986..20413
DNA (1428bp) protein (476aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=DNAA_NITWN rbh
dnaA; chromosome replication initiator DnaA
Chromosomal replication initiator protein DnaA {ECO:0000255|HAMAP-Rule:MF_00377}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" so
SCNpilot_cont_300_bf_scaffold_662_19
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20609..21727
DNA (1119bp) protein (373aa)
DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=323097 species="Bacter
DNA polymerase III subunit beta n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QS93_NITHX
SCNpilot_cont_300_bf_scaffold_662_20
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21909..22520)
DNA (612bp) protein (204aa)
Electron transport protein SCO1/SenC n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRN7_NITHX
electron transport protein SCO1/SenC
Electron transport protein SCO1/SenC {ECO:0000313|EMBL:ABE61110.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.
SCNpilot_cont_300_bf_scaffold_662_21
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22554..22727)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRN6_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE61111.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Ni
SCNpilot_cont_300_bf_scaffold_662_22
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22881..23339)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRN5_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE61112.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Ni
SCNpilot_cont_300_bf_scaffold_662_23
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23730..24422
DNA (693bp) protein (231aa)
RNA polymerase sigma factor n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRN4_NITHX
RNA polymerase sigma factor
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter ham
SCNpilot_cont_300_bf_scaffold_662_24
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24512..25033
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRN3_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE61114.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Ni
SCNpilot_cont_300_bf_scaffold_662_25
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25043..25384
DNA (342bp) protein (114aa)
Putative amicyanin protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRN2_NITHX
amicyanin precursor protein
Putative amicyanin protein {ECO:0000313|EMBL:ABE61115.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source=
SCNpilot_cont_300_bf_scaffold_662_26
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25408..25962)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRN1_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE61116.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgen
SCNpilot_cont_300_bf_scaffold_662_27
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26241..27269)
DNA (1029bp) protein (343aa)
DNA polymerase III, delta subunit {ECO:0000313|EMBL:ABE61001.1}; EC=2.7.7.7 {ECO:0000313|EMBL:ABE61001.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizo
DNA polymerase III, delta subunit n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRZ6_NITHX rbh
holA; DNA polymerase III subunit delta rbh
SCNpilot_cont_300_bf_scaffold_662_28
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27405..28091)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRZ7_NITHX rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABE61000.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgen
SCNpilot_cont_300_bf_scaffold_662_29
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28078..29199)
DNA (1122bp) protein (374aa)
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000255|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00049}; Short=LeuRS {ECO:0000255|HAMAP-Rule:MF_
Leucine--tRNA ligase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=SYL_NITHX
Suspect SCG annotation. See neighboring gene [SCNpilot_cont_300_bf_scaffold_662_30].
SCNpilot_cont_300_bf_scaffold_662_30
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(29141..30625)
DNA (1485bp) protein (495aa)
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000255|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00049}; Short=LeuRS {ECO:0000255|HAMAP-Rule:MF_
Leucine--tRNA ligase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=SYL_NITHX
Displaying 30 items

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