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SCNpilot_cont_300_bf_scaffold_705

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_705_1
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..325
DNA (324bp) protein (108aa)
Putative ATP-dependent exoDNAse n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ESN8_BRASB
ATP-dependent exoDNAse
Putative ATP-dependent exoDNAse {ECO:0000313|EMBL:ABQ39182.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizo
SCNpilot_cont_300_bf_scaffold_705_2
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

772..1272
DNA (501bp) protein (167aa)
Putative resolvase n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ESP2_BRASB
resolvase
Putative resolvase {ECO:0000313|EMBL:ABQ39186.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (str
SCNpilot_cont_300_bf_scaffold_705_3
unknown

Not on your lists

comp(1447..1701)
DNA (255bp) protein (85aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_705_4
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1894..3648
DNA (1755bp) protein (585aa)
UPI0003CEFE0B related cluster n=1 Tax=unknown RepID=UPI0003CEFE0B rbh
Uncharacterized protein {ECO:0000313|EMBL:KFD25689.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoi
hypothetical protein
SCNpilot_cont_300_bf_scaffold_705_5
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3645..4280
DNA (636bp) protein (212aa)
UPI0003CEB5F9 related cluster n=1 Tax=unknown RepID=UPI0003CEB5F9
Uncharacterized protein {ECO:0000313|EMBL:CEG10593.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
SCNpilot_cont_300_bf_scaffold_705_6
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4277..6709
DNA (2433bp) protein (811aa)
UPI0003CEEB63 related cluster n=1 Tax=unknown RepID=UPI0003CEEB63
Uncharacterized protein {ECO:0000313|EMBL:KFD25691.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoi
hypothetical protein
SCNpilot_cont_300_bf_scaffold_705_7
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6914..7837)
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002F25C49 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABE39528.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas
SCNpilot_cont_300_bf_scaffold_705_8
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7834..8154)
DNA (321bp) protein (107aa)
Transcriptional regulator n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q138G2_RHOPS
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:ABE39527.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomon
SCNpilot_cont_300_bf_scaffold_705_9
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8340..9587
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11KX2_MESSB rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABG61953.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp.
SCNpilot_cont_300_bf_scaffold_705_10
bacterium YEK0313, Bacteria

Not on your lists

9587..10039
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11KX3_MESSB
Uncharacterized protein {ECO:0000313|EMBL:CEJ12501.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_705_11
bacterium YEK0313, Bacteria

Not on your lists

10036..11070
DNA (1035bp) protein (345aa)
Patatin n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q138G5_RHOPS rbh
Putative sporulation hydrolase CotR {ECO:0000313|EMBL:CEJ12500.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
patatin rbh
SCNpilot_cont_300_bf_scaffold_705_12
bacterium YEK0313, Bacteria

Not on your lists

comp(11093..11533)
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00037AA502
Uncharacterized protein {ECO:0000313|EMBL:CEJ12499.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_705_13
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11688..12035
DNA (348bp) protein (116aa)
Putative DNA binding protein n=2 Tax=Rhizobium leguminosarum RepID=Q1M6J3_RHIL3
putative DNA binding protein
Putative DNA binding protein {ECO:0000313|EMBL:CAK03140.1}; TaxID=216596 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;"
SCNpilot_cont_300_bf_scaffold_705_14
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12025..13305
DNA (1281bp) protein (427aa)
Capsule biosynthesis enzymes related protein n=1 Tax=Rhizobium leguminosarum bv. viciae WSM1455 RepID=J0VD01_RHILV rbh
Capsule biosynthesis enzymes related protein {ECO:0000313|EMBL:EJC71186.1}; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium grou
hypothetical protein
SCNpilot_cont_300_bf_scaffold_705_15
Bradyrhizobium sp. ORS 278, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13525..13776)
DNA (252bp) protein (84aa)
Uncharacterized protein {ECO:0000313|EMBL:CAL79509.1}; TaxID=114615 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
SCNpilot_cont_300_bf_scaffold_705_16
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13815..15176)
DNA (1362bp) protein (454aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P5N4_9BRAD
Integrase {ECO:0000313|EMBL:ETR77534.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
phage integrase
SCNpilot_cont_300_bf_scaffold_705_17
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15359..17017)
DNA (1659bp) protein (553aa)
Resolvase domain n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VP48_RHOPX rbh
resolvase domain-containing protein
Resolvase domain {ECO:0000313|EMBL:ADU42494.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palust
SCNpilot_cont_300_bf_scaffold_705_18
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17014..17412)
DNA (399bp) protein (133aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VP47_RHOPX
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ADU42493.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodops
SCNpilot_cont_300_bf_scaffold_705_19
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17409..17762)
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00030B7912
Uncharacterized protein {ECO:0000313|EMBL:ENY79957.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
hypothetical protein
SCNpilot_cont_300_bf_scaffold_705_20
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17759..18049)
DNA (291bp) protein (97aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VP45_RHOPX
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ADU42491.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodops
SCNpilot_cont_300_bf_scaffold_705_21
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18194..18415)
DNA (222bp) protein (74aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JJV5_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI05269.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxido
SCNpilot_cont_300_bf_scaffold_705_22
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18418..19575)
DNA (1158bp) protein (386aa)
Conjugal transfer protein TrbI n=2 Tax=Oligotropha carboxidovorans RepID=F8BJW8_OLICM rbh
trbI2; conjugal transfer protein TrbI
Conjugal transfer protein TrbI {ECO:0000313|EMBL:AEI05268.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha ca
SCNpilot_cont_300_bf_scaffold_705_23
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19572..20564)
DNA (993bp) protein (331aa)
Conjugal transfer protein TrbG n=2 Tax=Oligotropha carboxidovorans RepID=B6JJV6_OLICO rbh
conjugal transfer protein TrbG/VirB9/CagX rbh
Conjugal transfer protein TrbG {ECO:0000313|EMBL:AEI05267.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha ca
SCNpilot_cont_300_bf_scaffold_705_24
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20623..21585)
DNA (963bp) protein (321aa)
P-type conjugative transfer protein TrbJ n=3 Tax=Oligotropha carboxidovorans RepID=B6JJW0_OLICO
trbJ2; P-type conjugal transfer protein TrbJ
P-type conjugal transfer protein TrbJ {ECO:0000313|EMBL:AEI05263.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotr
SCNpilot_cont_300_bf_scaffold_705_25
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21525..21878)
DNA (354bp) protein (118aa)
Conjugal transfer protein trbE n=2 Tax=Oligotropha carboxidovorans RepID=B6JJW1_OLICO
conjugal transfer ATPase TrbE
Conjugal transfer protein trbE {ECO:0000313|EMBL:AEI05262.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha ca
SCNpilot_cont_300_bf_scaffold_705_26
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21875..22060)
DNA (186bp) protein (62aa)
UPI0003CDF941 related cluster n=1 Tax=unknown RepID=UPI0003CDF941
Type I restriction enzyme EcoKI subunit R {ECO:0000313|EMBL:CEG09837.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia fel
SCNpilot_cont_300_bf_scaffold_705_27
unknown

Not on your lists

comp(22675..22854)
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_705_28
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23058..23561
DNA (504bp) protein (168aa)
FecI-like protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WV79_9BRAD rbh
FecI-like protein {ECO:0000313|EMBL:EAQ36111.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
fec I like protein
SCNpilot_cont_300_bf_scaffold_705_29
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23742..24698
DNA (957bp) protein (319aa)
FecR protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WV78_9BRAD rbh
FecR protein {ECO:0000313|EMBL:EAQ36110.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
FecR protein rbh
SCNpilot_cont_300_bf_scaffold_705_30
Methylophaga nitratireducenticrescens, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24825..27314
DNA (2490bp) protein (830aa)
hypothetical protein n=1 Tax=Comamonas sp. B-9 RepID=UPI00039568C4 rbh
TonB-dependent siderophore receptor
Methylophaga nitratireducenticrescens strain JAM1, complete genome {ECO:0000313|EMBL:AFI83027.1}; Flags: Precursor;; TaxID=754476 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales;
Displaying 30 items

View Taxonomy