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SCNpilot_cont_300_bf_scaffold_3070

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_3070_1
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..725)
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00038052D0
putative AraC family transcriptional regulatory protein
Putative AraC family transcriptional regulatory protein {ECO:0000313|EMBL:AGB74584.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobac
SCNpilot_cont_300_bf_scaffold_3070_2
Mesorhizobium sp. LNJC399B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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807..1742
DNA (936bp) protein (312aa)
Dehydrogenase n=1 Tax=Mesorhizobium sp. L2C089B000 RepID=V7GV48_9RHIZ
Dehydrogenase {ECO:0000313|EMBL:ESY01877.1}; TaxID=1287277 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC399B0
phytanoyl-CoA dioxygenase protein
SCNpilot_cont_300_bf_scaffold_3070_3
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1829..2665
DNA (837bp) protein (279aa)
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078538};; 3-deoxy-D-man
kdsA; 3-deoxy-8-phosphooctulonate synthase (EC:2.5.1.55)
2-dehydro-3-deoxyphosphooctonate aldolase n=1 Tax=Kaistia granuli RepID=UPI0003726009
SCNpilot_cont_300_bf_scaffold_3070_4
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2814..4052
DNA (1239bp) protein (413aa)
enolase (EC:4.2.1.11)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000
enolase n=1 Tax=Kaistia granuli RepID=UPI00036186CE
SCNpilot_cont_300_bf_scaffold_3070_5
Pseudomonas sp. MT-1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4340..4945
DNA (606bp) protein (202aa)
cupin n=1 Tax=Pseudomonas stutzeri RepID=UPI0002E2544E
XRE family transcriptional regulator {ECO:0000313|EMBL:BAP79305.1}; TaxID=150396 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseud
cupin
SCNpilot_cont_300_bf_scaffold_3070_6
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4955..6226)
DNA (1272bp) protein (424aa)
DNA polymerase IV (EC:2.7.7.7)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=266779 species="Bacteria; Proteobacteria; Alp
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000362EF27
SCNpilot_cont_300_bf_scaffold_3070_7
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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6508..6642
DNA (135bp) protein (45aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_0012
glutamyl-tRNA amidotransferase subunit C n=1 Tax=Kaistia granuli RepID=UPI00036D5BF8
gatC; aspartyl/glutamyl-tRNA amidotransferase subunit C
SCNpilot_cont_300_bf_scaffold_3070_8
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6675..8159
DNA (1485bp) protein (495aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=287752
glutamyl-tRNA(Gln) amidotransferase n=1 Tax=Kaistia granuli RepID=UPI0003807E82
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A
SCNpilot_cont_300_bf_scaffold_3070_9
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8166..8474
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036FC0D3
Chorismate mutase {ECO:0000313|EMBL:KKB82938.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
isochorismate pyruvate-lyase
SCNpilot_cont_300_bf_scaffold_3070_10
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8489..9694)
DNA (1206bp) protein (402aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=582899 species="Bacteria; Proteobacteria; Alphapro
Acetate kinase n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JPW9_HYPDA
acetate kinase
SCNpilot_cont_300_bf_scaffold_3070_11
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9889..10692
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036E9296
Putative phospholipid-binding domain protein {ECO:0000313|EMBL:AID30426.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" sourc
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3070_12
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10705..11688
DNA (984bp) protein (328aa)
Zn-dependent alcohol dehydrogenase (EC:1.1.1.1)
Putative Zn-dependent alcohol dehydrogenase n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J7D6_HYPSM rbh
Zinc-binding alcohol dehydrogenase family protein {ECO:0000313|EMBL:KFC63945.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="
SCNpilot_cont_300_bf_scaffold_3070_13
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11696..13150)
DNA (1455bp) protein (485aa)
Cation-transporting ATPase n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J7C9_HYPSM
Cation-transporting ATPase
Cation-transporting ATPase {ECO:0000313|EMBL:CCB67240.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium
Displaying 13 items

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