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SCNpilot_cont_300_bf_scaffold_3100

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_3100_1
unknown

Not on your lists

64..795
DNA (732bp) protein (244aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_3100_2
unknown

Not on your lists

747..986
DNA (240bp) protein (80aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_3100_3
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

983..1189
DNA (207bp) protein (69aa)
Uncharacterized protein {ECO:0000313|EMBL:EGP07292.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.
SCNpilot_cont_300_bf_scaffold_3100_4
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1173..2060
DNA (888bp) protein (296aa)
Phage-related integrase n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9JSD0_AGRVS rbh
intD; phage-related integrase
Phage-related integrase {ECO:0000313|EMBL:ACM35623.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" s
SCNpilot_cont_300_bf_scaffold_3100_5
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2568..3671
DNA (1104bp) protein (368aa)
iron ABC transporter substrate-binding protein n=1 Tax=Kaistia granuli RepID=UPI000377D3CE
ABC-type Fe3+ transport system, periplasmic component {ECO:0000313|EMBL:EJJ25802.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae;
iron ABC transporter substrate-binding protein
SCNpilot_cont_300_bf_scaffold_3100_6
Brucella sp. 83/13, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3802..4686
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036B1528
Acriflavin resistance protein
Binding-protein-dependent transport system inner membrane component {ECO:0000313|EMBL:EEZ34540.1}; TaxID=520449 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Bruce
SCNpilot_cont_300_bf_scaffold_3100_7
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4683..5465
DNA (783bp) protein (261aa)
spermidine/putrescine ABC transporter permease n=1 Tax=Kaistia granuli RepID=UPI0003691C3D rbh
binding--dependent transport system inner membrane component family protein
Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:AJZ59059.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkhold
SCNpilot_cont_300_bf_scaffold_3100_8
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5493..6563
DNA (1071bp) protein (357aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rho
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036B2D21 rbh
spermidine/putrescine ABC transporter ATPase
SCNpilot_cont_300_bf_scaffold_3100_9
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6638..8074)
DNA (1437bp) protein (479aa)
aldehyde dehydrogenase n=1 Tax=Kaistia granuli RepID=UPI00037C8973 rbh
aldehyde dehydrogenase
Aldehyde dehydrogenase {ECO:0000313|EMBL:ABR63277.1}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" sour
SCNpilot_cont_300_bf_scaffold_3100_10
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8233..8631)
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000362D50A
Uncharacterized protein {ECO:0000313|EMBL:EPE98011.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
gguC; hypothetical protein
SCNpilot_cont_300_bf_scaffold_3100_11
unknown

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8882..9205
DNA (324bp) protein (108aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_3100_12
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9220..9999)
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00035EE573
Possible transcriptional regulatory protein {ECO:0000313|EMBL:EAS51232.1}; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" source="
FadR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_3100_13
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10160..10627)
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036AA7F6
Protein COQ10 B, mitochondrial
Main chromosome, complete sequence {ECO:0000313|EMBL:CCE95676.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhiz
SCNpilot_cont_300_bf_scaffold_3100_14
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10634..11596)
DNA (963bp) protein (321aa)
Lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic
radical SAM protein n=1 Tax=Kaistia granuli RepID=UPI00037764E2 rbh
lipoyl synthase
SCNpilot_cont_300_bf_scaffold_3100_15
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11615..11866)
DNA (252bp) protein (84aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003791EB5
Putative membrane protein {ECO:0000313|EMBL:EJL23031.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" sour
transglycosylase-associated protein
SCNpilot_cont_300_bf_scaffold_3100_16
Labrenzia sp. C1B10, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11943..12191)
DNA (249bp) protein (83aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036A18E3
Membrane protein {ECO:0000313|EMBL:ERP97985.1}; TaxID=1397530 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia sp. C1B10.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3100_17
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12268..13083)
DNA (816bp) protein (272aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacter
dihydrolipoamide dehydrogenase n=1 Tax=Kaistia granuli RepID=UPI000370EB5B
dihydrolipoamide dehydrogenase
SCNpilot_cont_300_bf_scaffold_3100_18
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13068..13622)
DNA (555bp) protein (185aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacte
dihydrolipoamide dehydrogenase n=1 Tax=Kaistia granuli RepID=UPI000370EB5B
lpdA; dihydrolipoamide dehydrogenase
SCNpilot_cont_300_bf_scaffold_3100_19
Methylobacterium mesophilicum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13632..13994)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7XUV2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EMS41398.1}; TaxID=908290 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacteri
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3100_20
Lyngbya confervoides, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(14210..14446)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Roseobacter sp. CCS2 RepID=A4EIX8_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KIF43074.1}; TaxID=1574623 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya confervoides BDU141951.;"
hypothetical protein
Displaying 20 items

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