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SCNpilot_cont_300_bf_scaffold_3260

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_3260_1
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(74..2620)
DNA (2547bp) protein (849aa)
arylsulfatase (EC:3.1.6.1)
arylsulfatase n=1 Tax=Rhizobium sp. JGI 0001005-H05 RepID=UPI0003647071 rbh
Sulfatase {ECO:0000313|EMBL:CCM75374.1}; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium
SCNpilot_cont_300_bf_scaffold_3260_2
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2835..3023
DNA (189bp) protein (63aa)
ArsR family transcriptional regulator n=1 Tax=Kaistia granuli RepID=UPI00036C9FF1
ArsR family transcriptional regulator
ArsR family transcriptional regulator {ECO:0000313|EMBL:AHK03747.1}; TaxID=1435057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agr
SCNpilot_cont_300_bf_scaffold_3260_3
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3120..3647
DNA (528bp) protein (176aa)
ArsR family transcriptional regulator n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003756A6E
ArsR family transcriptional regulator {ECO:0000313|EMBL:KIC53728.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Br
protein tyrosine phosphatase
SCNpilot_cont_300_bf_scaffold_3260_4
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3658..4722
DNA (1065bp) protein (355aa)
arsenic transporter n=1 Tax=Paracoccus sp. TRP RepID=UPI000225F73C
Arsenical-resistance protein {ECO:0000313|EMBL:CDN94495.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; A
putative arsenite efflux pump protein
SCNpilot_cont_300_bf_scaffold_3260_5
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4719..5141
DNA (423bp) protein (141aa)
Arsenate reductase {ECO:0000256|RuleBase:RU362029}; EC=1.20.4.1 {ECO:0000256|RuleBase:RU362029};; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; B
arsenate reductase (EC:1.20.4.1)
Glutaredoxin-dependent arsenate reductase n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QSW2_9BRAD
SCNpilot_cont_300_bf_scaffold_3260_6
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5134..6357
DNA (1224bp) protein (408aa)
Major facilitator superfamily protein n=1 Tax=Methylobacterium sp. GXF4 RepID=I9CSN4_9RHIZ
Methylobacterium aquaticum DNA, complete genome, strain: MA-22A {ECO:0000313|EMBL:BAQ44824.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Me
putative Major Facilitator Family (MFS) transporter
SCNpilot_cont_300_bf_scaffold_3260_7
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6530..7852
DNA (1323bp) protein (441aa)
Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A5E8_STAND rbh
PAS/PAC sensor-containing diguanylate cyclase rbh
Diguanylate cyclase with PAS/PAC sensor {ECO:0000313|EMBL:ADH88072.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya
SCNpilot_cont_300_bf_scaffold_3260_8
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7965..9761
DNA (1797bp) protein (599aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; I
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036405D2 rbh
DNA/RNA helicase, superfamily I
SCNpilot_cont_300_bf_scaffold_3260_9
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10355..10966
DNA (612bp) protein (204aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; I
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036405D2
Superfamily I DNA and RNA helicase
SCNpilot_cont_300_bf_scaffold_3260_10
Burkholderiaceae bacterium 26, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10966..11910
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI000360BE99
Membrane protein {ECO:0000313|EMBL:KJJ95381.1}; TaxID=1619951 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 26.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3260_11
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11915..12550)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CUJ1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR83928.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3260_12
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12537..13094)
DNA (558bp) protein (186aa)
RNA polymerase sigma factor n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3INR0_9RHIZ
RNA polymerase sigma factor protein
RNA polymerase sigma factor protein {ECO:0000313|EMBL:AJD39627.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizo
SCNpilot_cont_300_bf_scaffold_3260_13
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13294..13551
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HP31_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EPF00240.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3260_14
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13616..13894
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IC95_BEII9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB96692.1}; Flags: Precursor;; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Be
SCNpilot_cont_300_bf_scaffold_3260_15
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14047..14784
DNA (738bp) protein (246aa)
UPF0276 protein RGCCGE502_00890 n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3I546_9RHIZ
xylose isomerase domain-containing protein
UPF0276 protein RGR602_CH00252 {ECO:0000256|HAMAP-Rule:MF_00697}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizob
SCNpilot_cont_300_bf_scaffold_3260_16
Rhizobium sp. R1-200B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14796..15044
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IEF8_AZOC5
Uncharacterized protein {ECO:0000313|EMBL:KEQ07046.1}; TaxID=1509405 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3260_17
Rhizobium sp. R1-200B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15022..15543
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LSB1_RHITR
Uncharacterized protein {ECO:0000313|EMBL:KEQ07046.1}; TaxID=1509405 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3260_18
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15540..16019
DNA (480bp) protein (160aa)
DoxX family protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LQN0_RHITR
DoxX family protein
DoxX family protein {ECO:0000313|EMBL:AGB73031.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="R
SCNpilot_cont_300_bf_scaffold_3260_19
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16022..16531)
DNA (510bp) protein (170aa)
Fusaric acid resistance protein conserved region n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IEW2_XANP2
fusaric acid resistance protein region
Fusaric acid resistance protein conserved region {ECO:0000313|EMBL:ABS66555.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" sour
SCNpilot_cont_300_bf_scaffold_3260_20
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17909..18367)
DNA (459bp) protein (153aa)
Transcriptional regulator, MarR family n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IEW3_XANP2
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ABS66556.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xantho
SCNpilot_cont_300_bf_scaffold_3260_21
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18451..19869)
DNA (1419bp) protein (473aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobiu
Two-component sensor histidine kinase protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JKB8_AGRRK rbh
two-component sensor histidine kinase rbh
SCNpilot_cont_300_bf_scaffold_3260_22
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19869..20591)
DNA (723bp) protein (241aa)
Two-component response regulator protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JKB7_AGRRK rbh
two-component response regulator protein rbh
Chemotaxis protein CheY {ECO:0000313|EMBL:KEA08911.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" sour
SCNpilot_cont_300_bf_scaffold_3260_23
Ectothiorhodospira sp. PHS-1, Ectothiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20816..22858
DNA (2043bp) protein (681aa)
Flavodoxin/nitric oxide synthase n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G1T5_9GAMM rbh
Flavodoxin/nitric oxide synthase {ECO:0000313|EMBL:EHQ51772.1}; TaxID=519989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Ectothiorhodospira.;" source=
NAD-binding flavodoxin rbh
SCNpilot_cont_300_bf_scaffold_3260_24
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22943..23698)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F3I1_9RHIZ rbh
Cytoplasmic protein {ECO:0000313|EMBL:KFL27854.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3260_25
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23939..25624
DNA (1686bp) protein (562aa)
UPI0003CED529 related cluster n=1 Tax=unknown RepID=UPI0003CED529
sugar kinase, ribokinase
Sugar kinase, ribokinase {ECO:0000313|EMBL:AGB44062.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium aus
SCNpilot_cont_300_bf_scaffold_3260_26
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25619..26443)
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI000367D39F rbh
Creatinine amidohydrolase
Creatinine amidohydrolase, putative {ECO:0000313|EMBL:ACI98854.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="R
SCNpilot_cont_300_bf_scaffold_3260_27
Cronobacter condimenti, Cronobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26607..27557)
DNA (951bp) protein (317aa)
Sulfofructose kinase {ECO:0000256|HAMAP-Rule:MF_00999}; Short=SF kinase {ECO:0000256|HAMAP-Rule:MF_00999};; EC=2.7.1.184 {ECO:0000256|HAMAP-Rule:MF_00999};; TaxID=1073999 species="Bacteria; Proteobact
ribokinase (EC:2.7.1.15)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI000376BF06
SCNpilot_cont_300_bf_scaffold_3260_28
Roseibacterium elongatum, Roseibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27554..28144)
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI00035D07EB
Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC
Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC {ECO:0000313|EMBL:AHM05742.1}; TaxID=1294273 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; R
SCNpilot_cont_300_bf_scaffold_3260_29
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28101..28565)
DNA (465bp) protein (155aa)
ABC transporter ATP-binding component {ECO:0000313|EMBL:CBS89436.1}; EC=3.6.3.- {ECO:0000313|EMBL:CBS89436.1};; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; R
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI00035D07EB
ABC transporter ; ATP-binding component
SCNpilot_cont_300_bf_scaffold_3260_30
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28562..29350)
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI000365FFEA
Uncharacterized protein {ECO:0000313|EMBL:ENY98235.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
uridine phosphorylase
Displaying items 1-30 of 54 in total

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