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SCNpilot_cont_300_bf_scaffold_3526

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_3526_1
Asticcacaulis sp. YBE204, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..1314)
DNA (1314bp) protein (438aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. YBE204 RepID=V4NMV4_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:ESQ77356.1}; TaxID=1282363 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis s
SCNpilot_cont_300_bf_scaffold_3526_2
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1527..2264)
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003689BE6
Pyrimidine 5'-nucleotidase {ECO:0000313|EMBL:EKS37192.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49
HAD-superfamily hydrolase
SCNpilot_cont_300_bf_scaffold_3526_3
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2275..3180)
DNA (906bp) protein (302aa)
Acetylglutamate kinase {ECO:0000256|SAAS:SAAS00245375}; EC=2.7.2.- {ECO:0000256|SAAS:SAAS00277142};; EC=2.7.2.8 {ECO:0000256|SAAS:SAAS00245383};; TaxID=631454 species="Bacteria; Proteobacteria; Alphap
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003789685 rbh
acetylglutamate kinase
SCNpilot_cont_300_bf_scaffold_3526_4
Mesorhizobium sp. LNJC391B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3420..4007
DNA (588bp) protein (196aa)
UPI0003CF072D related cluster n=1 Tax=unknown RepID=UPI0003CF072D
Uncharacterized protein {ECO:0000313|EMBL:ESY17063.1}; TaxID=1287273 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
SCNpilot_cont_300_bf_scaffold_3526_5
Mesorhizobium sp. LNJC391B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4018..4383
DNA (366bp) protein (122aa)
UPI0003CF929C related cluster n=1 Tax=unknown RepID=UPI0003CF929C
Uncharacterized protein {ECO:0000313|EMBL:ESY17000.1}; TaxID=1287273 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
SCNpilot_cont_300_bf_scaffold_3526_6
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4484..5125)
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000376FB82 rbh
engB; GTPase EngB
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 /
SCNpilot_cont_300_bf_scaffold_3526_7
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5150..6166)
DNA (1017bp) protein (339aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037281A6
inner membrane protein translocase component YidC, long form
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_018
SCNpilot_cont_300_bf_scaffold_3526_8
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6166..6984)
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037281A6
inner membrane protein translocase component YidC
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_018
SCNpilot_cont_300_bf_scaffold_3526_9
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6981..7166)
DNA (186bp) protein (62aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037281A6
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_018
SCNpilot_cont_300_bf_scaffold_3526_10
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7156..7602)
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037518EC
rnpA; ribonuclease P protein component
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rul
SCNpilot_cont_300_bf_scaffold_3526_11
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(7646..7780)
DNA (135bp) protein (45aa)
50S ribosomal protein L34 n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=RL34_METS4
rpmH; 50S ribosomal protein L34
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methy
SCNpilot_cont_300_bf_scaffold_3526_12
bacterium YEK0313, Bacteria

Not on your lists

8141..9601
DNA (1461bp) protein (487aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036D5354
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain-containing protein
SCNpilot_cont_300_bf_scaffold_3526_13
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10354..11385)
DNA (1032bp) protein (344aa)
CoA reductase n=1 Tax=Burkholderia kururiensis RepID=UPI00037DDBC7 rbh
Epimerase {ECO:0000313|EMBL:KGI77895.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
NAD-dependent epimerase/dehydratase rbh
SCNpilot_cont_300_bf_scaffold_3526_14
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11463..11912
DNA (450bp) protein (150aa)
TetR family transcriptional regulator n=1 Tax=Pseudomonas sp. PAMC 25886 RepID=UPI00028856D4
TetR family transcriptional regulator {ECO:0000313|EMBL:KGE67145.1}; TaxID=1324332 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pse
TetR family transcriptional regulator
Displaying 14 items

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