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SCNpilot_cont_300_bf_scaffold_3720

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_3720_1
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..346
DNA (345bp) protein (115aa)
oxidoreductase n=1 Tax=Kaistia granuli RepID=UPI0003601B20
GFO/IDH/MocA family oxidoreductase
Putative GFO/IDH/MocA family oxidoreductase {ECO:0000313|EMBL:CAK04009.1}; TaxID=216596 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group
SCNpilot_cont_300_bf_scaffold_3720_2
unknown

Not on your lists

comp(357..527)
DNA (171bp) protein (57aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_3720_3
unknown

Not on your lists

comp(558..740)
DNA (183bp) protein (61aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_3720_4
unknown

Not on your lists

comp(1054..1401)
DNA (348bp) protein (116aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_3720_5
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1505..1687
DNA (183bp) protein (61aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003783CBE
Uncharacterized protein {ECO:0000313|EMBL:KGM33401.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limos
LysR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_3720_6
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1827..2780
DNA (954bp) protein (318aa)
Transcriptional regulator, AraC family n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8ELM4_METSB
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ACK50018.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methyl
SCNpilot_cont_300_bf_scaffold_3720_7
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2921..3562)
DNA (642bp) protein (214aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y4P0_9RHIZ
Trehalose utilization {ECO:0000313|EMBL:KFC69721.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3720_8
Streptomyces sp. Tu 6176, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3998..4225
DNA (228bp) protein (76aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003818E82
GDP-mannose pyrophosphatase {ECO:0000313|EMBL:EYT81455.1}; TaxID=1470557 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. Tu 6176.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3720_9
Kaistia granuli, Kaistia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4305..4688
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000370A3BF
SCNpilot_cont_300_bf_scaffold_3720_10
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4705..5151)
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000376E6EB
HxlR family transcriptional regulator {ECO:0000313|EMBL:ELT48711.1}; TaxID=1234597 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactr
hxlR-like helix-turn-helix family protein
SCNpilot_cont_300_bf_scaffold_3720_11
Pseudomonas taiwanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5307..6125
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Pseudomonas taiwanensis SJ9 RepID=V7D1T8_9PSED
Uncharacterized protein {ECO:0000313|EMBL:ESW36342.1}; TaxID=1388762 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas taiwa
NmrA family protein
SCNpilot_cont_300_bf_scaffold_3720_12
Labrenzia alexandrii, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6129..6899)
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000370D581
Conserved domain protein {ECO:0000313|EMBL:EEE45812.1}; TaxID=244592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia alexandri
ATP-binding protein
SCNpilot_cont_300_bf_scaffold_3720_13
unknown

Not on your lists

7360..7524
DNA (165bp) protein (55aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_3720_14
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7556..8602
DNA (1047bp) protein (349aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003762215
porin
Porin {ECO:0000313|EMBL:ABS69047.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotro
SCNpilot_cont_300_bf_scaffold_3720_15
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8962..9663
DNA (702bp) protein (234aa)
DNA repair protein RecO n=1 Tax=Nitratireductor indicus C115 RepID=K2N639_9RHIZ
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1231190 species="Bacteria; Proteobacteria; Al
recO; DNA repair protein RecO
SCNpilot_cont_300_bf_scaffold_3720_16
Kaistia granuli, Kaistia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9717..10019)
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003788272
SCNpilot_cont_300_bf_scaffold_3720_17
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10209..10892
DNA (684bp) protein (228aa)
Ribose 1,5-bisphosphate phosphokinase PhnN {ECO:0000313|EMBL:EYR77500.1}; EC=2.7.4.23 {ECO:0000313|EMBL:EYR77500.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037F729F
phosphonate metabolism protein
SCNpilot_cont_300_bf_scaffold_3720_18
unknown

Not on your lists

11026..11640
DNA (615bp) protein (205aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_3720_19
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11656..12081)
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037C2D60
thioesterase superfamily protein
Thioesterase superfamily protein {ECO:0000313|EMBL:ACL61482.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methy
SCNpilot_cont_300_bf_scaffold_3720_20
Hoeflea sp. BRH_c9, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12152..12898)
DNA (747bp) protein (249aa)
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Rhizobium sp. CF142 RepID=J1T1G2_9RHIZ
5-formyltetrahydrofolate cyclo-ligase {ECO:0000313|EMBL:KJS17081.1}; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea s
5-formyltetrahydrofolate cyclo-ligase family protein
SCNpilot_cont_300_bf_scaffold_3720_21
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13071..14105)
DNA (1035bp) protein (345aa)
glutamate--ammonia ligase (EC:6.3.1.2) rbh
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae;
Glutamine synthetase n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A329_STAND rbh
SCNpilot_cont_300_bf_scaffold_3720_22
unknown

Not on your lists

14541..14714
DNA (174bp) protein (58aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_3720_23
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14863..15132)
DNA (270bp) protein (90aa)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacterac
Glutamine synthetase n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A3U6_9PROT
glnA2; glutamine synthetase
Displaying 23 items

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