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SCNpilot_cont_300_bf_scaffold_3913

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_3913_1
Elstera litoralis, Elstera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..321)
DNA (321bp) protein (107aa)
sugar ABC transporter substrate-binding protein n=1 Tax=Rhizobium leguminosarum RepID=UPI0003662924
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJV09370.1}; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" sour
sugar ABC transporter substrate-binding protein
SCNpilot_cont_300_bf_scaffold_3913_2
Elstera litoralis, Elstera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(538..1491)
DNA (954bp) protein (318aa)
Transcriptional regulator, DeoR family n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A5N3_STAND rbh
DeoR faimly transcriptional regulator {ECO:0000313|EMBL:KJV09371.1}; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elster
DeoR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_3913_3
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1657..3300
DNA (1644bp) protein (548aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037A760E
Ribulokinase {ECO:0000313|EMBL:KGD96849.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobi
rtlK; L-ribulokinase
SCNpilot_cont_300_bf_scaffold_3913_4
Ochrobactrum sp. EGD-AQ16, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3297..4628)
DNA (1332bp) protein (444aa)
MFS transporter n=1 Tax=Ochrobactrum sp. EGD-AQ16 RepID=U1XCG6_9RHIZ
MFS transporter {ECO:0000313|EMBL:ERI12233.1}; TaxID=1390361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. EGD-AQ16.;"
major facilitator superfamily protein
SCNpilot_cont_300_bf_scaffold_3913_5
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4798..5271)
DNA (474bp) protein (158aa)
MerR family transcriptional regulator n=1 Tax=Ochrobactrum anthropi RepID=UPI000288DAD8
MerR family transcriptional regulator {ECO:0000313|EMBL:EXL10524.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquam
MerR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_3913_6
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5585..6754
DNA (1170bp) protein (390aa)
3-carboxymuconate cyclase n=1 Tax=Phyllobacterium sp. YR531 RepID=J3C3N0_9RHIZ rbh
3-carboxymuconate cyclase {ECO:0000313|EMBL:EJM97803.1}; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacteri
6-phosphogluconolactonase
SCNpilot_cont_300_bf_scaffold_3913_7
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6794..7906
DNA (1113bp) protein (371aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036812B1 rbh
Uncharacterized protein {ECO:0000313|EMBL:CDX16527.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3913_8
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7997..8347
DNA (351bp) protein (117aa)
UPF0076 protein yabJ n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9A0Z3_RHIFH
hypothetical protein
UPF0076 protein yabJ {ECO:0000313|EMBL:CCE94894.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" sourc
SCNpilot_cont_300_bf_scaffold_3913_9
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8380..9081)
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000360DA83 rbh
Membrane protein {ECO:0000313|EMBL:ESY77376.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC22
membrane protein
SCNpilot_cont_300_bf_scaffold_3913_10
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9185..10234)
DNA (1050bp) protein (350aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Sta
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037D886B
integral membrane sensor signal transduction histidine kinase
Displaying 10 items

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