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SCNpilot_cont_300_bf_scaffold_1705

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1705_1
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..421)
DNA (420bp) protein (140aa)
5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC:5.3.3.10)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI000363E6CE
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase {ECO:0000313|EMBL:KKB80679.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="De
SCNpilot_cont_300_bf_scaffold_1705_2
Pluralibacter gergoviae, Pluralibacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(444..1232)
DNA (789bp) protein (263aa)
N-acyl homoserine lactonase AttM n=2 Tax=Agrobacterium tumefaciens (strain C58 / ATCC 33970) RepID=AHLLM_AGRT5
Beta-lactamase {ECO:0000313|EMBL:KJM58411.1}; TaxID=61647 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pluralibacter.;" source="Pluralibacter gergovia
blcC; Zn-dependent gamma butyryl lactone lactonase
SCNpilot_cont_300_bf_scaffold_1705_3
Nocardia farcinica, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1258..1683)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Nocardia farcinica (strain IFM 10152) RepID=Q5Z0F6_NOCFA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAD56085.1}; TaxID=247156 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia farcinica (strain IFM 10152).;"
SCNpilot_cont_300_bf_scaffold_1705_4
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1727..2680)
DNA (954bp) protein (318aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Frankia sp. CN3 RepID=G6HD48_9ACTO
Putative ABC transporter permease protein {ECO:0000313|EMBL:CCV07541.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source=
putative ABC transporter permease protein
SCNpilot_cont_300_bf_scaffold_1705_5
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2738..4264)
DNA (1527bp) protein (509aa)
ABC transporter related n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EU37_9RHIZ
ABC transporter related {ECO:0000313|EMBL:CCV07540.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium met
ABC transporter
SCNpilot_cont_300_bf_scaffold_1705_6
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4277..5539)
DNA (1263bp) protein (421aa)
Putative ABC transporter substrate-binding protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5ERQ1_9RHIZ
Putative ABC transporter substrate-binding protein {ECO:0000313|EMBL:CCV07539.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;
putative ABC transporter substrate-binding protein
SCNpilot_cont_300_bf_scaffold_1705_7
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5819..6595
DNA (777bp) protein (259aa)
short-chain dehydrogenase n=1 Tax=Bradyrhizobium japonicum RepID=UPI00037AC338
Short chain dehydrogenase/reductase {ECO:0000313|EMBL:EJZ31793.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Brady
short-chain dehydrogenase
SCNpilot_cont_300_bf_scaffold_1705_8
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6691..7419
DNA (729bp) protein (243aa)
IclR helix-turn-helix domain protein n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4XA07_9BURK
IclR helix-turn-helix domain protein {ECO:0000313|EMBL:EFF76272.1}; TaxID=742159 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achrom
IclR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_1705_9
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7424..8041)
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI00037DAD9F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADH91262.1}; Flags: Precursor;; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Stark
SCNpilot_cont_300_bf_scaffold_1705_10
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8495..9019
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DBR9_BRAJP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL05439.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium ja
SCNpilot_cont_300_bf_scaffold_1705_11
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9081..10175)
DNA (1095bp) protein (365aa)
Regulatory protein MarR n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8T8L6_MESCW
MarR family transcriptional regulator
Regulatory protein MarR {ECO:0000313|EMBL:ADV11788.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium cice
SCNpilot_cont_300_bf_scaffold_1705_12
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10234..10887)
DNA (654bp) protein (218aa)
Hydrolase n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y3C9_MESOW rbh
hydrolase rbh
Hydrolase {ECO:0000313|EMBL:AEH87236.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (str
SCNpilot_cont_300_bf_scaffold_1705_13
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11175..12251
DNA (1077bp) protein (359aa)
Rcorf71 n=1 Tax=Agrobacterium rhizogenes RepID=A8W080_AGRRH rbh
Rcorf71 {ECO:0000313|EMBL:ABW33628.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacteriu
ABC transporter periplasmic protein
SCNpilot_cont_300_bf_scaffold_1705_14
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12322..12966
DNA (645bp) protein (215aa)
ABC transporter,ATP-binding protein n=2 Tax=Rhizobium meliloti RepID=M4MHN7_RHIML
ABC transporter,ATP-binding protein
ABC transporter,ATP-binding protein {ECO:0000313|EMBL:AGG70791.1}; TaxID=1286640 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhi
Displaying 14 items

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