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SCNpilot_cont_300_bf_scaffold_2431

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2431_1
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..690)
DNA (690bp) protein (230aa)
UPI0003CE9424 related cluster n=1 Tax=unknown RepID=UPI0003CE9424
ABC transporter permease {ECO:0000313|EMBL:ESY64962.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp
ABC transporter inner membrane protein
SCNpilot_cont_300_bf_scaffold_2431_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(699..1655)
DNA (957bp) protein (319aa)
ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic ligand binding protein n=2 Tax=Rhodopseudomonas palustris RepID=B3QIQ7_RHOPT
nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein
ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic ligand binding protein {ECO:0000313|EMBL:ACF01410.1}; Flags: Precursor;; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteoba
SCNpilot_cont_300_bf_scaffold_2431_3
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1854..3143)
DNA (1290bp) protein (430aa)
Putative acyl-CoA dehydrogenase n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EEW2_BRASB
acyl-CoA dehydrogenase
Putative acyl-CoA dehydrogenase {ECO:0000313|EMBL:ABQ34706.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizo
SCNpilot_cont_300_bf_scaffold_2431_4
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3130..4392)
DNA (1263bp) protein (421aa)
Acyl-CoA dehydrogenase type 2 domain n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UX32_VARPE rbh
acyL-CoA dehydrogenase type 2 domain
Acyl-CoA dehydrogenase type 2 domain {ECO:0000313|EMBL:ADU37668.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovora
SCNpilot_cont_300_bf_scaffold_2431_5
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4439..5851)
DNA (1413bp) protein (471aa)
nitrilotriacetate monooxygenase family protein (EC:1.14.14.10)
Nitrilotriacetate monooxygenase family protein {ECO:0000313|EMBL:AJC81776.1}; EC=1.14.14.10 {ECO:0000313|EMBL:AJC81776.1};; TaxID=1432049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizob
N5,N10-methylene tetrahydromethanopterin reductase n=1 Tax=Xanthobacteraceae RepID=UPI00036BC474
SCNpilot_cont_300_bf_scaffold_2431_6
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6265..7338
DNA (1074bp) protein (358aa)
Dioxygenase, isopenicillin N synthase n=1 Tax=Phyllobacterium sp. YR531 RepID=J3CGY3_9RHIZ rbh
Dioxygenase, isopenicillin N synthase {ECO:0000313|EMBL:EJN05604.1}; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="P
2OG-Fe(II) oxygenase
SCNpilot_cont_300_bf_scaffold_2431_7
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7364..8674
DNA (1311bp) protein (437aa)
O-acetylhomoserine aminocarboxypropyltransferase {ECO:0000313|EMBL:ESZ30285.1}; EC=2.5.1.49 {ECO:0000313|EMBL:ESZ30285.1};; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizob
UPI0003D060F9 related cluster n=1 Tax=unknown RepID=UPI0003D060F9
O-acetylhomoserine/O-acetylserine sulfhydrylase
SCNpilot_cont_300_bf_scaffold_2431_8
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9019..9984
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003821EAF
Taurine ABC transporter periplasmic binding protein {ECO:0000313|EMBL:EHH07192.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.
taurine ABC transporter periplasmic binding protein
SCNpilot_cont_300_bf_scaffold_2431_9
Mesorhizobium sp. LNJC405B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10041..10814
DNA (774bp) protein (258aa)
Taurine import ATP-binding protein TauB {ECO:0000256|HAMAP-Rule:MF_01714}; EC=3.6.3.36 {ECO:0000256|HAMAP-Rule:MF_01714};; TaxID=1287281 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobi
tauB; taurine transporter ATP-binding subunit (EC:3.6.3.36)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000361B323
SCNpilot_cont_300_bf_scaffold_2431_10
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10811..11668
DNA (858bp) protein (286aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KFT9_MESAW rbh
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component rbh
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component {ECO:0000313|EMBL:AGB43254.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacte
SCNpilot_cont_300_bf_scaffold_2431_11
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11727..12614
DNA (888bp) protein (296aa)
Taurine dioxygenase {ECO:0000313|EMBL:KGM33804.1}; EC=1.14.11.17 {ECO:0000313|EMBL:KGM33804.1};; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillace
taurine dioxygenase n=1 Tax=Serratia marcescens RepID=UPI0002E9022C rbh
tauD; alpha-ketoglutarate-dependent taurine dioxygenase
SCNpilot_cont_300_bf_scaffold_2431_12
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12969..13757
DNA (789bp) protein (263aa)
Periplasmic component of amino acid ABC-type transporter/signal transduction system n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HTD2_9RHIZ
Periplasmic component of amino acid ABC-type transporter/signal transduction system {ECO:0000313|EMBL:EJN04978.1}; Flags: Precursor;; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacter
general L-amino acid ABC transporter substrate-binding protein
SCNpilot_cont_300_bf_scaffold_2431_13
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13778..14959
DNA (1182bp) protein (394aa)
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family n=1 Tax=Phyllobacterium sp. YR531 RepID=J3CFX3_9RHIZ
Amino acid ABC transporter permease {ECO:0000313|EMBL:KKC40990.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epid
bztB; general L-amino acid transport system permease protein
SCNpilot_cont_300_bf_scaffold_2431_14
unknown

Not on your lists

14956..15192
DNA (237bp) protein (79aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2431_15
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15195..15959
DNA (765bp) protein (255aa)
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family n=1 Tax=Phyllobacterium sp. YR531 RepID=J2VXL3_9RHIZ
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family {ECO:0000313|EMBL:EJN04980.1}; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales
aapM; putative amino acid ABC transporter, permease protein
SCNpilot_cont_300_bf_scaffold_2431_16
unknown

Not on your lists

comp(16237..16377)
DNA (141bp) protein (47aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2431_17
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16623..17219
DNA (597bp) protein (199aa)
Alkanesulfonate monooxygenase {ECO:0000256|HAMAP-Rule:MF_01229, ECO:0000256|SAAS:SAAS00023380}; EC=1.14.14.5 {ECO:0000256|HAMAP-Rule:MF_01229, ECO:0000256|SAAS:SAAS00023380};; FMNH2-dependent aliphati
alkanesulfonate monooxygenase, FMNH(2)-dependent (EC:1.14.14.5)
Alkanesulfonate monooxygenase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7F879_9RHIZ
SCNpilot_cont_300_bf_scaffold_2431_18
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17216..18604
DNA (1389bp) protein (463aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF142 RepID=J2L2L6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJJ27289.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2431_19
Asticcacaulis biprosthecium, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18657..19265)
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Meganema perideroedes RepID=UPI00036FF316
Putative peptide chain release factor H {ECO:0000313|EMBL:EGF93186.1}; TaxID=715226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="
class I peptide chain release factor domain-containing protein
SCNpilot_cont_300_bf_scaffold_2431_20
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20270..21631)
DNA (1362bp) protein (454aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CZ87_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EYR77889.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2431_21
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21733..22755)
DNA (1023bp) protein (341aa)
Ribose transport system permease protein RbsC n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CUN7_9RHIZ rbh
Ribose transport system permease protein RbsC {ECO:0000313|EMBL:EYR77888.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinel
ribose ABC transport system
SCNpilot_cont_300_bf_scaffold_2431_22
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22752..23141)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Klebsiella oxytoca MGH 42 RepID=V3L9W8_KLEOX
ABC transporter
D-ribose transporter ATP-binding protein {ECO:0000313|EMBL:AID90331.1}; TaxID=1333852 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" sourc
SCNpilot_cont_300_bf_scaffold_2431_23
Acyrthosiphon pisum, Acyrthosiphon, Hemiptera, Neoptera, Arthropoda, Metazoa

Not on your lists

23221..23790
DNA (570bp) protein (190aa)
Uncharacterized protein (Fragment) n=1 Tax=Acyrthosiphon pisum RepID=J9LLV1_ACYPI
SCNpilot_cont_300_bf_scaffold_2431_24
Mesorhizobium sp. LSHC414A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24278..25240)
DNA (963bp) protein (321aa)
UPI0003CE2D80 related cluster n=1 Tax=unknown RepID=UPI0003CE2D80 rbh
LacI family transcriptional regulator {ECO:0000313|EMBL:ESX78090.1}; TaxID=1287287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mes
LacI family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_2431_25
Mesorhizobium sp. LSHC414A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25420..26529)
DNA (1110bp) protein (370aa)
UPI0003CE2A62 related cluster n=1 Tax=unknown RepID=UPI0003CE2A62 rbh
LacI family transcriptional regulator {ECO:0000313|EMBL:ESX78091.1}; TaxID=1287287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mes
LacI family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_2431_26
Loktanella cinnabarina, Loktanella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26755..28491)
DNA (1737bp) protein (579aa)
Glycerol-3-phosphate dehydrogenase n=1 Tax=Loktanella cinnabarina LL-001 RepID=U2Z6P0_9RHOB rbh
Glycerol-3-phosphate dehydrogenase {ECO:0000313|EMBL:GAD56722.1}; TaxID=1337093 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Loktanella.;" source="Loktane
FAD dependent oxidoreductase family protein
SCNpilot_cont_300_bf_scaffold_2431_27
Loktanella cinnabarina, Loktanella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28488..29093)
DNA (606bp) protein (202aa)
Putative carbohydrate kinase, FGGY family n=1 Tax=Loktanella cinnabarina LL-001 RepID=U3APR0_9RHOB
Putative carbohydrate kinase, FGGY family {ECO:0000313|EMBL:GAD56723.1}; TaxID=1337093 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Loktanella.;" source="
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2431_28
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29327..30790)
DNA (1464bp) protein (488aa)
Ribose transport system permease protein RbsC n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CDB1_9RHIZ rbh
Ribose/xylose/arabinose/galactoside ABC-type transport system permease component {ECO:0000313|EMBL:EYR78258.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizo
Ribose/xylose/arabinose/galactoside ABC-type transport systems permease component
SCNpilot_cont_300_bf_scaffold_2431_29
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30787..32325)
DNA (1539bp) protein (513aa)
Ribose import ATP-binding protein RbsA 2 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5BXS7_9RHIZ rbh
ABC-type sugar transport system ATPase component {ECO:0000313|EMBL:EYR78259.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shi
ABC-type sugar transport system ATPase component
SCNpilot_cont_300_bf_scaffold_2431_30
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32402..33463)
DNA (1062bp) protein (354aa)
Monosaccharide ABC transporter substrate-binding protein, CUT2 family n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EFS8_9RHIZ rbh
ABC-type sugar transport system periplasmic component {ECO:0000313|EMBL:EYR78260.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source
sugar ABC transporter periplasmic protein
Displaying items 1-30 of 39 in total

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