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SCNpilot_cont_300_bf_scaffold_2625

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2625_1
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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22..402
DNA (381bp) protein (127aa)
Transcriptional regulator, HxlR family n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FKA1_STIAD
HxlR family transcriptional regulator
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:ADO75470.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella
SCNpilot_cont_300_bf_scaffold_2625_2
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(554..1555)
DNA (1002bp) protein (334aa)
Transcriptional regulator n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KSG0_MESAW
HTH-type transcriptional activator NagR {ECO:0000313|EMBL:KEC80571.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sin
transcriptional regulator
SCNpilot_cont_300_bf_scaffold_2625_3
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1627..2106
DNA (480bp) protein (160aa)
UPI0003CE8295 related cluster n=1 Tax=unknown RepID=UPI0003CE8295
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:CDX39781.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="M
cupin
SCNpilot_cont_300_bf_scaffold_2625_4
Burkholderia jiangsuensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2148..3122)
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000379923A rbh
glutathione S-transferase domain-containing protein
Uncharacterized protein {ECO:0000313|EMBL:KAK42789.1}; TaxID=1458357 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia jian
SCNpilot_cont_300_bf_scaffold_2625_5
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3302..3745
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00035F5F59
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACP24715.1}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source
SCNpilot_cont_300_bf_scaffold_2625_6
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3761..4456
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000371C83C
Ribonuclease T {ECO:0000313|EMBL:KJC58335.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM29
ribonuclease T2
SCNpilot_cont_300_bf_scaffold_2625_7
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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4467..5069
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036275AB
Glutathione S-transferase family protein {ECO:0000313|EMBL:ADZ69649.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793
glutathione S-transferase
SCNpilot_cont_300_bf_scaffold_2625_8
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5111..5953
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037E5E40 rbh
Inositol monophosphatase {ECO:0000313|EMBL:KFG69027.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata
inositol monophosphatase
SCNpilot_cont_300_bf_scaffold_2625_9

Not on your lists

6237..6569
DNA (333bp) protein (111aa)
Cation/cationic drug transporter n=1 Tax=Herbaspirillum sp. CF444 RepID=J3DDD5_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KKN93239.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
qacE; Quaternary ammonium compound-resistance protein qacE
SCNpilot_cont_300_bf_scaffold_2625_10
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6655..7299
DNA (645bp) protein (215aa)
Deaminase n=1 Tax=Rhizobium sp. Pop5 RepID=K0VUJ6_9RHIZ
bifunctional deaminase-reductase-like protein
Bifunctional deaminase-reductase-like protein {ECO:0000313|EMBL:AHK44736.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer grou
SCNpilot_cont_300_bf_scaffold_2625_11
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7378..7692)
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037BB5FD
OmpA-like transmembrane domain
OmpA-like transmembrane domain, putative {ECO:0000313|EMBL:ADZ69646.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793
SCNpilot_cont_300_bf_scaffold_2625_12
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8300..9121
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000375CE0E rbh
Uncharacterized protein {ECO:0000313|EMBL:EJM98745.1}; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium
short-chain dehydrogenase/reductase SDR
SCNpilot_cont_300_bf_scaffold_2625_13
Labrenzia sp. C1B10, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9094..10236
DNA (1143bp) protein (381aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037B6398
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_0
uvrC; excinuclease ABC subunit C
Displaying 13 items

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