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SCNpilot_cont_300_bf_scaffold_2626

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2626_1
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..725)
DNA (723bp) protein (241aa)
Extracellular solute-binding protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JU98_9PROT
Glutamate/aspartate periplasmic-binding protein {ECO:0000313|EMBL:EXI80355.1}; Flags: Precursor;; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" sour
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2626_2
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

853..2445
DNA (1593bp) protein (531aa)
Polar amino acid uptake family ABC transporter, periplasmic substrate-binding protein n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0A8I4_COLFT
Uncharacterized protein {ECO:0000313|EMBL:EXI90605.1}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
polar amino acid uptake family ABC transporter periplasmic substrate-binding protein
SCNpilot_cont_300_bf_scaffold_2626_3
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2442..3590
DNA (1149bp) protein (383aa)
Polar amino acid uptake family ABC transporter, permease protein n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0A8I5_COLFT
Amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family {ECO:0000313|EMBL:EXI80356.1}; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumu
polar amino acid uptake family ABC transporter permease
SCNpilot_cont_300_bf_scaffold_2626_4
unknown

Not on your lists

3587..4138
DNA (552bp) protein (184aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2626_5
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4126..5475
DNA (1350bp) protein (450aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2J4U5_9PROT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE78056.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum
Serine phosphatase RsbU regulator sigma subunit
SCNpilot_cont_300_bf_scaffold_2626_6
Achromobacter sp. RTa, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5494..5829)
DNA (336bp) protein (112aa)
Anti-sigma factor antagonist n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GR25_PUSST
Anti-sigma F factor antagonist; Anti-sigma B factor antagonist RsbV
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobact
SCNpilot_cont_300_bf_scaffold_2626_7
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6026..7789
DNA (1764bp) protein (588aa)
Putative xanthine/uracil permease n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GQK5_PUSST rbh
Xanthine/uracil/vitamin C permease
Xanthine/uracil/vitamin C permease {ECO:0000313|EMBL:CDM24003.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castel
SCNpilot_cont_300_bf_scaffold_2626_8
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7819..8655
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JU85_9PROT
tRNA mo(5)U34 methyltransferase {ECO:0000313|EMBL:EXI80358.1}; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. B
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2626_9
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8658..9668)
DNA (1011bp) protein (337aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YKY9_9RHIZ
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EIM24631.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;
GAF sensor-containing diguanylate cyclase
SCNpilot_cont_300_bf_scaffold_2626_10
Enterococcus sp. HSIEG1, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9916..13557
DNA (3642bp) protein (1214aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI00037C6A32 rbh
Lipid A export ATP-binding/permease proteinMsbA {ECO:0000313|EMBL:EQC79873.1}; TaxID=1316414 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococ
ABC transporter permease
SCNpilot_cont_300_bf_scaffold_2626_11
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13572..14831)
DNA (1260bp) protein (420aa)
Rhodocoxin reductase {ECO:0000313|EMBL:CCV03259.1}; EC=1.18.1.- {ECO:0000313|EMBL:CCV03259.1};; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; M
Rhodocoxin reductase n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EF09_9RHIZ
rubredoxin reductase
SCNpilot_cont_300_bf_scaffold_2626_12
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14831..15151)
DNA (321bp) protein (107aa)
2Fe-2S ferredoxin n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z252_9BRAD
2Fe-2S ferredoxin
2Fe-2S ferredoxin {ECO:0000313|EMBL:BAM87079.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotro
SCNpilot_cont_300_bf_scaffold_2626_13
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15165..15476)
DNA (312bp) protein (104aa)
3-oxoacyl-ACP reductase n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZLH9_9BRAD
3-oxoacyl-ACP reductase
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:BAM87080.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium ol
SCNpilot_cont_300_bf_scaffold_2626_14
Loktanella vestfoldensis, Loktanella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15476..15871)
DNA (396bp) protein (132aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100)
Probable short-chain dehydrogenase, secreted n=1 Tax=Loktanella vestfoldensis SKA53 RepID=A3V8R1_9RHOB
Probable short-chain dehydrogenase, secreted {ECO:0000313|EMBL:EAQ05492.1}; TaxID=314232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Loktanella.;" source
SCNpilot_cont_300_bf_scaffold_2626_15
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15868..16482)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SPH3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCD96100.1}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2626_16
Loktanella vestfoldensis, Loktanella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16479..17924)
DNA (1446bp) protein (482aa)
Succinate-semialdehyde dehydrogenase n=1 Tax=Loktanella vestfoldensis SKA53 RepID=A3V8Q9_9RHOB rbh
Succinate-semialdehyde dehydrogenase {ECO:0000313|EMBL:EAQ05490.1}; TaxID=314232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Loktanella.;" source="Loktan
succinate-semialdehyde dehydrogenase I
SCNpilot_cont_300_bf_scaffold_2626_17
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17941..18264)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z1S2_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM87083.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium ol
SCNpilot_cont_300_bf_scaffold_2626_18
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18521..20329)
DNA (1809bp) protein (603aa)
Phosphoenolpyruvate synthase {ECO:0000313|EMBL:ABQ33818.1}; EC=2.7.9.2 {ECO:0000313|EMBL:ABQ33818.1};; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiace
Phosphoenolpyruvate synthase n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ECC4_BRASB rbh
hypothetical protein rbh
SCNpilot_cont_300_bf_scaffold_2626_19
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20399..21502)
DNA (1104bp) protein (368aa)
phosphoenolpyruvate synthase (EC:2.7.9.2) rbh
Putative phosphoenolpyruvate synthase (Pyruvate, water dikinase) (PEP synthase) {ECO:0000313|EMBL:ABQ33819.1}; EC=2.7.9.2 {ECO:0000313|EMBL:ABQ33819.1};; TaxID=288000 species="Bacteria; Proteobacteria
Putative phosphoenolpyruvate synthase (Pyruvate, water dikinase) (PEP synthase) n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ECC5_BRASB rbh
SCNpilot_cont_300_bf_scaffold_2626_20
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21567..22727)
DNA (1161bp) protein (387aa)
Putative cytochrome P450 {ECO:0000313|EMBL:CCD96105.1}; EC=1.14.-.- {ECO:0000313|EMBL:CCD96105.1};; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae;
Putative cytochrome P450 n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SPH8_9BRAD rbh
putative cytochrome P450
SCNpilot_cont_300_bf_scaffold_2626_21
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22920..24383)
DNA (1464bp) protein (488aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0S3Y8_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:CCD88915.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
hypothetical protein rbh
SCNpilot_cont_300_bf_scaffold_2626_22

Not on your lists

comp(24491..25420)
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=termite gut metagenome RepID=S0DE43_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CCO21372.1}; TaxID=433724 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="termite gut metagenome.;"
helix-turn-helix domain protein
SCNpilot_cont_300_bf_scaffold_2626_23

Not on your lists

25688..27214
DNA (1527bp) protein (509aa)
salicylaldehyde dehydrogenase n=1 Tax=Rhizobium sp. JGI 0001005-K05 RepID=UPI00037D3797 rbh
Putative aldehyde dehydrogenase {ECO:0000313|EMBL:CCO21373.1}; TaxID=433724 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="termite gut metagenome.;"
Vanillin: NAD oxidoreductase ()
SCNpilot_cont_300_bf_scaffold_2626_24
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27256..28464
DNA (1209bp) protein (403aa)
Putative branched-chain amino acid ABC transporter n=1 Tax=Rhizobium freirei PRF 81 RepID=N6VF66_9RHIZ
Putative branched-chain amino acid ABC transporter {ECO:0000313|EMBL:ENN89747.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacteriu
putative branched-chain amino acid ABC transporter substrate-binding protein
SCNpilot_cont_300_bf_scaffold_2626_25
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28606..29346
DNA (741bp) protein (247aa)
UPI0003CF99D6 related cluster n=1 Tax=unknown RepID=UPI0003CF99D6
Leucine/isoleucine/valine transporter subunit ATP-binding component of ABC superfamily {ECO:0000313|EMBL:CDX59792.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; P
ABC transporter ATP-binding protein
SCNpilot_cont_300_bf_scaffold_2626_26
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29343..29564
DNA (222bp) protein (74aa)
Putative branched-chain amino acid ABC transporter, ATP-binding protein n=2 Tax=Rhizobium etli RepID=B3Q3Y8_RHIE6
putative branched-chain amino acid ABC transporter ATP-binding protein
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:KEC69562.1}; TaxID=1408223 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacteri
SCNpilot_cont_300_bf_scaffold_2626_27
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29561..30010
DNA (450bp) protein (150aa)
UPI0003CF0E30 related cluster n=1 Tax=unknown RepID=UPI0003CF0E30
ABC transporter family protein {ECO:0000313|EMBL:AID28546.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobi
ABC transporter ATP-binding protein
SCNpilot_cont_300_bf_scaffold_2626_28
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30007..30906
DNA (900bp) protein (300aa)
ABC transporter permease n=1 Tax=Rhizobium gallicum RepID=UPI000379CB6C
Branched-chain amino acid transport system / permease component family protein {ECO:0000313|EMBL:AID28545.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phylloba
inner-membrane translocator
SCNpilot_cont_300_bf_scaffold_2626_29
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30903..31385
DNA (483bp) protein (161aa)
ABC transporter permease n=1 Tax=Acidovorax radicis RepID=UPI000237663A
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
ABC transporter permease
Displaying 29 items

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