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SCNpilot_cont_300_bf_scaffold_2834

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2834_1
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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72..386
DNA (315bp) protein (105aa)
ferredoxin n=1 Tax=Hoeflea sp. 108 RepID=UPI00037BF0A8
ferredoxin
Ferredoxin {ECO:0000313|EMBL:AHB05917.1}; TaxID=1416914 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa 3kgm.;"
SCNpilot_cont_300_bf_scaffold_2834_2
unknown

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383..484
DNA (102bp) protein (34aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2834_3
Celeribacter indicus, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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481..1932
DNA (1452bp) protein (484aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036A5246 rbh
aldehyde dehydrogenase
Aldehyde dehydrogenase {ECO:0000313|EMBL:AJE46885.1}; TaxID=1208324 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Celeribacter indi
SCNpilot_cont_300_bf_scaffold_2834_4
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1951..2712
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036A3E5C
putative sulfite exporter, TauE/SafE family
Putative sulfite exporter, TauE/SafE family {ECO:0000313|EMBL:AGU53359.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="V
SCNpilot_cont_300_bf_scaffold_2834_5
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2739..3653
DNA (915bp) protein (305aa)
Ornithine cyclodeaminase/mu-crystallin n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y0B6_LEPCP rbh
ornithine cyclodeaminase/mu-crystallin
Ornithine cyclodeaminase/mu-crystallin {ECO:0000313|EMBL:ACB36595.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (s
SCNpilot_cont_300_bf_scaffold_2834_6
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3668..4318)
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037ECDD6 rbh
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ACB36594.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (s
SCNpilot_cont_300_bf_scaffold_2834_7
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4566..5573)
DNA (1008bp) protein (336aa)
CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase AscD {ECO:0000313|EMBL:AEI80789.1}; EC=1.17.1.- {ECO:0000313|EMBL:AEI80789.1};; TaxID=1042878 species="Bacteria; Proteobacteria; Betaprot
CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase AscD n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GR44_CUPNN rbh
GntR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_2834_8
Achromobacter sp. RTa, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5628..6107)
DNA (480bp) protein (160aa)
CDP-alcohol phosphatidyltransferase n=1 Tax=Hoeflea sp. 108 RepID=UPI000365F475
CDP-alcohol phosphatidyltransferase {ECO:0000313|EMBL:KGE00094.1}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achrom
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2834_9
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6145..6891)
DNA (747bp) protein (249aa)
aldehyde dehydrogenase n=1 Tax=Hoeflea sp. 108 RepID=UPI00036FE8CB
putative coenzyme PQQ synthesis protein C
Putative coenzyme PQQ synthesis protein C {ECO:0000313|EMBL:AGU53363.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Var
SCNpilot_cont_300_bf_scaffold_2834_10
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7311..8012)
DNA (702bp) protein (234aa)
DNA-binding transcriptional regulator HcaR n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z781_9SPHN
DNA-binding transcriptional regulator HcaR {ECO:0000313|EMBL:EGD59499.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" s
LysR family transcriptional regulator
Displaying 10 items

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