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SCNpilot_cont_300_bf_scaffold_2852

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2852_1
Labrenzia sp. C1B10, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..903)
DNA (903bp) protein (301aa)
MFS transporter {ECO:0000313|EMBL:ERP97213.1}; EC=1.2.4.2 {ECO:0000313|EMBL:ERP97213.1};; TaxID=1397530 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labre
MFS transporter n=1 Tax=Kaistia granuli RepID=UPI00035FEB9D
sucA; 2-oxoglutarate dehydrogenase E1 component (Alpha-ketoglutarate dehydrogenase)
SCNpilot_cont_300_bf_scaffold_2852_2
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(948..1769)
DNA (822bp) protein (274aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizo
succinyl-CoA synthetase subsunit alpha n=1 Tax=Kaistia granuli RepID=UPI0003802743
succinyl-CoA synthetase subunit alpha
SCNpilot_cont_300_bf_scaffold_2852_3
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1769..2548)
DNA (780bp) protein (260aa)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558};
succinyl-CoA synthetase subunit beta (EC:6.2.1.5)
malate--CoA ligase subunit beta n=1 Tax=Kaistia granuli RepID=UPI00037A6F41
SCNpilot_cont_300_bf_scaffold_2852_4
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2949..3914)
DNA (966bp) protein (322aa)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904};; TaxID=991905 species="Bacteria; Pr
malate dehydrogenase n=1 Tax=Kaistia granuli RepID=UPI00037D3FB9 rbh
mdh; malate dehydrogenase 1
SCNpilot_cont_300_bf_scaffold_2852_5
Brucella abortus, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4074..5243)
DNA (1170bp) protein (390aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037ECFCE
AFG1-like ATPase family protein
AFG1-family ATPase {ECO:0000313|EMBL:EEX56091.1}; TaxID=520452 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella abortus bv. 4 str. 292.;"
SCNpilot_cont_300_bf_scaffold_2852_6
Pseudovibrio sp. JE062, Pseudovibrio, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5272..5754)
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000367311B
Outer membrane lipoprotein, Omp19, bacterial
Outer membrane lipoprotein Omp19 {ECO:0000313|EMBL:EEA95306.1}; TaxID=439495 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pseudovibrio.;" source="Pseudovi
SCNpilot_cont_300_bf_scaffold_2852_7
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5981..6367)
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00035F0751
Putative lactoylglutathione lyase {ECO:0000313|EMBL:EIG60367.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhi
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2852_8
Kaistia granuli, Kaistia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6429..6611)
DNA (183bp) protein (61aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037E7020
SCNpilot_cont_300_bf_scaffold_2852_9
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6687..7466)
DNA (780bp) protein (260aa)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
succinate dehydrogenase iron-sulfur subunit n=1 Tax=Kaistia granuli RepID=UPI00035DDBAA
Succinate dehydrogenase iron-sulfur subunit
SCNpilot_cont_300_bf_scaffold_2852_10
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7477..9300)
DNA (1824bp) protein (608aa)
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobia
succinate dehydrogenase n=1 Tax=Kaistia granuli RepID=UPI00035FDA84 rbh
sdhA; succinate dehydrogenase flavoprotein subunit
SCNpilot_cont_300_bf_scaffold_2852_11
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9302..9679)
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000369B504
Succinate dehydrogenase, hydrophobic membrane anchor protein {ECO:0000313|EMBL:KFC63410.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.
succinate dehydrogenase hydrophobic membrane anchor protein
SCNpilot_cont_300_bf_scaffold_2852_12
Labrenzia aggregata, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9694..10092)
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037D2209
Succinate dehydrogenase, cytochrome b556 subunit
Succinate dehydrogenase cytochrome B-556 subunit {ECO:0000313|EMBL:EAV43635.1}; TaxID=384765 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" sou
SCNpilot_cont_300_bf_scaffold_2852_13
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10290..10670
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9A2B6_RHIFH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCE97681.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" so
SCNpilot_cont_300_bf_scaffold_2852_14
bacterium YEK0313, Bacteria

Not on your lists

10771..11883
DNA (1113bp) protein (371aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|H
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase n=1 Tax=Kaistia granuli RepID=UPI00035F2A31
SCNpilot_cont_300_bf_scaffold_2852_15
Rhizobium sp. R1-200B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12040..12225
DNA (186bp) protein (62aa)
50S ribosomal protein L32 n=1 Tax=Kaistia granuli RepID=UPI0003815178
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=1509405 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;
rpmF; 50S ribosomal protein L32
SCNpilot_cont_300_bf_scaffold_2852_16
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13162..13968
DNA (807bp) protein (269aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00035EA1A1
GGDEF domain-containing protein
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EKS37332.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" sour
SCNpilot_cont_300_bf_scaffold_2852_17
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13973..14266)
DNA (294bp) protein (98aa)
Putative pterin-4-alpha-carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Short=PHS {ECO:0000256|HAMAP-Rule:MF_00434};; EC=4.2.1.96 {ECO:0000256|HAMAP-Rule:MF_00434};; 4-alpha-hydroxy-tetra
Putative pterin-4-alpha-carbinolamine dehydratase n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BQG5_9RHIZ
pterin-4a-carbinolamine dehydratase
SCNpilot_cont_300_bf_scaffold_2852_18
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14263..14805)
DNA (543bp) protein (181aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1144310 species="B
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036E10EB
ligT; 2`-5` RNA ligase
SCNpilot_cont_300_bf_scaffold_2852_19
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14890..15093)
DNA (204bp) protein (68aa)
NADP-dependent oxidoreductase n=1 Tax=Methyloferula stellata RepID=UPI0003798381
Putative oxidoreductase, NADP(H)-dependent aldo-keto reductase {ECO:0000313|EMBL:KFC68130.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bose
aldo/keto reductase
SCNpilot_cont_300_bf_scaffold_2852_20
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15096..15905)
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000377580E
aldo/keto reductase
Aldo/keto reductase {ECO:0000313|EMBL:ACB97216.1}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp
SCNpilot_cont_300_bf_scaffold_2852_21
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15952..16584)
DNA (633bp) protein (211aa)
Multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1 {ECO:0000313|EMBL:CDX30354.1}; EC=3.1.1.5 {ECO:0000313|EMBL:CDX30354.1};; EC=3.1.2.- {ECO:0000313|EMBL:CDX30354.1};; Tax
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000363223C
acyl-CoA thioesterase
SCNpilot_cont_300_bf_scaffold_2852_22
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16668..17405
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00035E1B38
ABC transporter ATPase
ABC transporter ATPase subunit {ECO:0000313|EMBL:BAF89762.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium
SCNpilot_cont_300_bf_scaffold_2852_23
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17402..19924
DNA (2523bp) protein (841aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000371A66D
Efflux ABC transporter permease
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:ADZ68876.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793
SCNpilot_cont_300_bf_scaffold_2852_24
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20065..20817
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003755C6B rbh
FIG005935: membrane protein {ECO:0000313|EMBL:CDO59551.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ec
FtsH-interacting integral membrane protein
SCNpilot_cont_300_bf_scaffold_2852_25
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20897..21433
DNA (537bp) protein (179aa)
Sortase-like acyltransferase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YMV0_9RHIZ
Sortase-like acyltransferase {ECO:0000313|EMBL:EIM25292.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga loto
N-acetyltransferase GCN5
SCNpilot_cont_300_bf_scaffold_2852_26
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21502..21756)
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00035FDB93
hypothetical protein
Hypothetical conserved protein {ECO:0000313|EMBL:ADZ68874.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1
SCNpilot_cont_300_bf_scaffold_2852_27
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22301..23254
DNA (954bp) protein (318aa)
acetyl-CoA carboxylase, carboxyl transferase subunit alpha (EC:6.4.1.2)
acetyl-CoA carboxylase subunit alpha n=1 Tax=Kaistia granuli RepID=UPI0003794F80
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00176990}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=
SCNpilot_cont_300_bf_scaffold_2852_28
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23377..24552
DNA (1176bp) protein (392aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003828E98 rbh
transcriptional regulator
Putative transcriptional regulatory protein {ECO:0000313|EMBL:ADZ68770.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25
Displaying 28 items

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