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SCNpilot_cont_300_bf_scaffold_4176

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_4176_1
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..258)
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000368CC81
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACJ01294.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillu
SCNpilot_cont_300_bf_scaffold_4176_2
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

372..1145
DNA (774bp) protein (258aa)
Hydroxyacylglutathione hydrolase {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352}; EC=3.1.2.6 {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352};; Glyoxalase II {ECO:0000
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003812F6E rbh
hydroxyacylglutathione hydrolase
SCNpilot_cont_300_bf_scaffold_4176_3
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1142..1576
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J2HB78_9CAUL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EJL32783.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. A
SCNpilot_cont_300_bf_scaffold_4176_4
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1732..2124
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00035D4083
rplS; 50S ribosomal protein L19
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/A
SCNpilot_cont_300_bf_scaffold_4176_5
Rhodospirillum rubrum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2223..3038
DNA (816bp) protein (272aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000376003A rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC21141.1}; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillu
SCNpilot_cont_300_bf_scaffold_4176_6
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3324..4742
DNA (1419bp) protein (473aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM i
isopropylmalate isomerase n=1 Tax=Kaistia granuli RepID=UPI00037E84D0 rbh
leuC; 3-isopropylmalate dehydratase large subunit
SCNpilot_cont_300_bf_scaffold_4176_7
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5147..5560
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00035DA8DC
Zn-dependent protease {ECO:0000313|EMBL:KKB13786.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_4176_8
Lyngbya confervoides, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

5659..6264
DNA (606bp) protein (202aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031, ECO:0000256|SAAS:SAAS00089872};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rul
isopropylmalate isomerase n=1 Tax=Kaistia granuli RepID=UPI000365DFC5
leuD; 3-isopropylmalate dehydratase small subunit
SCNpilot_cont_300_bf_scaffold_4176_9
Kaistia granuli, Kaistia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6398..6673)
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00035FE911
SCNpilot_cont_300_bf_scaffold_4176_10
Kaistia granuli, Kaistia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6794..7069)
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00035FE911
SCNpilot_cont_300_bf_scaffold_4176_11
Kaistia granuli, Kaistia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7206..7481)
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000371F5E6
SCNpilot_cont_300_bf_scaffold_4176_12
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7813..8724)
DNA (912bp) protein (304aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036D46DF
HpcH/HpaI aldolase/citrate lyase family protein
HpcH/HpaI aldolase/citrate lyase family {ECO:0000313|EMBL:ADZ68577.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793
SCNpilot_cont_300_bf_scaffold_4176_13
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8904..9758
DNA (855bp) protein (285aa)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; N
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036F7E9D
pdxK; Pyridoxine kinase
SCNpilot_cont_300_bf_scaffold_4176_14
bacterium YEK0313, Bacteria

Not on your lists

9926..10435
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037819F9
Uncharacterized protein {ECO:0000313|EMBL:CEJ11169.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_4176_15
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10585..10998
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000372EB9D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIB16060.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasi
SCNpilot_cont_300_bf_scaffold_4176_16
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11036..11545
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003745B32
UPF0303 protein N865_04600 {ECO:0000256|HAMAP-Rule:MF_00761}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL
Hypothetical protein
SCNpilot_cont_300_bf_scaffold_4176_17
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11642..13066)
DNA (1425bp) protein (475aa)
dihydropyrimidine dehydrogenase subunit A n=1 Tax=Kaistia granuli RepID=UPI00036AA85D rbh
gltD; glutamate synthase subunit beta
Small subunit 1 glutamate synthase {ECO:0000313|EMBL:BAF86459.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizob
SCNpilot_cont_300_bf_scaffold_4176_18
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13076..15421)
DNA (2346bp) protein (782aa)
Glutamate synthase (NADH) large subunit {ECO:0000313|EMBL:KFB09122.1}; EC=1.4.1.14 {ECO:0000313|EMBL:KFB09122.1};; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phy
glutamate synthase (EC:1.4.7.1)
glutamate synthase n=1 Tax=Kaistia granuli RepID=UPI0003723EF0
Displaying 18 items

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