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SCNpilot_cont_300_bf_scaffold_24235

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_24235_1
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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196..396
DNA (201bp) protein (67aa)
preprotein translocase subunit SecE n=1 Tax=Kaistia granuli RepID=UPI00037FB28D
Preprotein translocase, SecE subunit
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / C
SCNpilot_cont_300_bf_scaffold_24235_2
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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408..938
DNA (531bp) protein (177aa)
transcription antitermination protein NusG n=1 Tax=Kaistia granuli RepID=UPI00036B5AD3 rbh
NusG antitermination factor
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphu
SCNpilot_cont_300_bf_scaffold_24235_3
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1084..1515
DNA (432bp) protein (144aa)
50S ribosomal protein L11 n=1 Tax=Kaistia granuli RepID=UPI000375ACB7
50S ribosomal protein L11
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesor
SCNpilot_cont_300_bf_scaffold_24235_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1518..1730
DNA (213bp) protein (71aa)
50S ribosomal protein L1 n=1 Tax=Methyloferula stellata RepID=UPI000365218E
Suspect SCG annotation. See neighboring gene [SCNpilot_cont_300_bf_scaffold_24235_5].
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
rplA; 50S ribosomal protein L1
SCNpilot_cont_300_bf_scaffold_24235_5
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1696..2175
DNA (480bp) protein (160aa)
50S ribosomal protein L1 n=1 Tax=Kaistia granuli RepID=UPI00036B3C06
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methyloba
50S ribosomal protein L1
SCNpilot_cont_300_bf_scaffold_24235_6
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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2486..3004
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037BF725
rplJ; 50S ribosomal protein L10
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilv
SCNpilot_cont_300_bf_scaffold_24235_7
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3049..3426
DNA (378bp) protein (126aa)
50S ribosomal protein L7/L12 n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=RL7_MESSB
rplL; 50S ribosomal protein L7/L12
50S ribosomal protein L7/L12 {ECO:0000255|HAMAP-Rule:MF_00368}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativo
SCNpilot_cont_300_bf_scaffold_24235_8
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3542..5182
DNA (1641bp) protein (547aa)
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su
DNA-directed RNA polymerase subunit beta n=1 Tax=Kaistia granuli RepID=UPI0003823013
Displaying 8 items

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