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SCNpilot_cont_300_bf_scaffold_5645

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_5645_1
Methylobacterium populi, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..437)
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Methylobacterium sp. MB200 RepID=UPI000345FE64
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACB82870.1}; Flags: Precursor;; TaxID=441620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobact
SCNpilot_cont_300_bf_scaffold_5645_2
Methylobacterium populi, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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517..1416
DNA (900bp) protein (300aa)
Transcriptional regulator, LysR family n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZJV5_METPB
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ACB82869.1}; TaxID=441620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source=
SCNpilot_cont_300_bf_scaffold_5645_3
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1426..3231)
DNA (1806bp) protein (602aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036B88C5 rbh
ABC transporter ATPase
ABC transporter, ATPase subunit {ECO:0000313|EMBL:ADZ71492.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC
SCNpilot_cont_300_bf_scaffold_5645_4
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3371..3940
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003801FCB
ECF subfamily RNA polymerase sigma-24 factor
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:ERF79863.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" sourc
SCNpilot_cont_300_bf_scaffold_5645_5
Methylobacterium mesophilicum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3930..4568
DNA (639bp) protein (213aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036DB441
Uncharacterized protein {ECO:0000313|EMBL:EMS41016.1}; TaxID=908290 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacteri
hypothetical protein
SCNpilot_cont_300_bf_scaffold_5645_6
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4675..6126
DNA (1452bp) protein (484aa)
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00037EBA45
signal transduction histidine kinase
Signal transduction histidine kinase {ECO:0000313|EMBL:ACS56874.1}; TaxID=395491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizo
SCNpilot_cont_300_bf_scaffold_5645_7
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6190..7335)
DNA (1146bp) protein (382aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000380A350 rbh
classes I and II superfamily aminotransferase
Aminotransferase, classes I and II superfamily {ECO:0000313|EMBL:ADZ71418.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG
SCNpilot_cont_300_bf_scaffold_5645_8
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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7700..8272
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000360E706
fasciclin
Fasciclin {ECO:0000313|EMBL:AKD53955.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_5645_9
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8427..10580)
DNA (2154bp) protein (718aa)
methylmalonyl-CoA mutase (EC:5.4.99.2)
Methylmalonyl-CoA mutase, large subunit {ECO:0000313|EMBL:ACL59440.1}; EC=5.4.99.2 {ECO:0000313|EMBL:ACL59440.1};; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Met
methylmalonyl-CoA mutase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031AE307
SCNpilot_cont_300_bf_scaffold_5645_10
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10577..11527)
DNA (951bp) protein (317aa)
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:ACA14790.1}; EC=5.4.99.2 {ECO:0000313|EMBL:ACA14790.1};; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriacea
methylmalonyl-CoA mutase n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI0003666D64
methylmalonyl-CoA mutase
SCNpilot_cont_300_bf_scaffold_5645_11
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12274..12915)
DNA (642bp) protein (214aa)
ferredoxin n=1 Tax=Kaistia granuli RepID=UPI000375D7F4
hypothetical protein
Hypothetical cytosolic protein {ECO:0000313|EMBL:ADZ71407.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1
Displaying 11 items

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