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SCNpilot_cont_300_bf_scaffold_1067

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1067_1
unknown

Not on your lists

3..119
DNA (117bp) protein (39aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1067_2
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

116..574
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI00028A124E
Uncharacterized protein {ECO:0000313|EMBL:GAO55502.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1067_3
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

574..3207
DNA (2634bp) protein (878aa)
Hopanoid biosynthesis associated RND transporter like protein HpnN n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z7I0_9SPHN
Hopanoid-associated RND transporter, hpnN {ECO:0000313|EMBL:GAO55501.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" s
hopanoid biosynthesis associated RND transporter-like protein HpnN
SCNpilot_cont_300_bf_scaffold_1067_4
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3309..4196)
DNA (888bp) protein (296aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z7G4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAO55486.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1067_5
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4286..5194)
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CA0F6 rbh
Uncharacterized protein {ECO:0000313|EMBL:GAO55487.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1067_6
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5204..6094)
DNA (891bp) protein (297aa)
Hopanoid biosynthesis associated protein HpnK n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z7G6_9SPHN
Cellobiose phosphotransferase system celC {ECO:0000313|EMBL:GAO55488.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" s
hopanoid biosynthesis associated protein HpnK
SCNpilot_cont_300_bf_scaffold_1067_7
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6180..7628)
DNA (1449bp) protein (483aa)
radical SAM protein n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI0002881EB0 rbh
Fe-S oxidoreductase {ECO:0000313|EMBL:GAO55489.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium
hopanoid biosynthesis associated radical SAM protein HpnJ
SCNpilot_cont_300_bf_scaffold_1067_8
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7698..8741)
DNA (1044bp) protein (348aa)
hopanoid biosynthesis associated glycosyl transferase HpnI n=1 Tax=Novosphingobium nitrogenifigens RepID=UPI00037F2A1F
Hopanoid biosynthesis associated glucosyltransferase {ECO:0000313|EMBL:GAO40257.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomo
glycosyl transferase 2 family protein
SCNpilot_cont_300_bf_scaffold_1067_9
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8962..9966
DNA (1005bp) protein (335aa)
Dihydroflavonol-4-reductase {ECO:0000313|EMBL:GAO55491.1}; EC=1.1.1.219 {ECO:0000313|EMBL:GAO55491.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingom
NAD-dependent dehydratase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CA0FB rbh
hopanoid-associated sugar epimerase
SCNpilot_cont_300_bf_scaffold_1067_10
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9936..10856
DNA (921bp) protein (307aa)
Phytoene synthase {ECO:0000313|EMBL:GAO55492.1}; EC=2.5.1.32 {ECO:0000313|EMBL:GAO55492.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae;
Hopene-associated glycosyltransferase HpnB n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z7H0_9SPHN
HpnB protein
SCNpilot_cont_300_bf_scaffold_1067_11
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10856..11035
DNA (180bp) protein (60aa)
Phytoene synthase {ECO:0000313|EMBL:GAO55492.1}; EC=2.5.1.32 {ECO:0000313|EMBL:GAO55492.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae;
glycosyl transferase family 2 n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI0002889A5F
hopene-associated glycosyltransferase HpnB
SCNpilot_cont_300_bf_scaffold_1067_12
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11032..11856
DNA (825bp) protein (275aa)
Squalene synthase HpnC n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z7H1_9SPHN
Squalene synthase HpnC {ECO:0000313|EMBL:EGD59483.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi
squalene synthase HpnC
SCNpilot_cont_300_bf_scaffold_1067_13
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11853..12686
DNA (834bp) protein (278aa)
Phytoene synthase {ECO:0000313|EMBL:GAO55494.1}; EC=2.5.1.32 {ECO:0000313|EMBL:GAO55494.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae;
phytoene synthase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CA0FF rbh
squalene synthase HpnD
SCNpilot_cont_300_bf_scaffold_1067_14
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12683..13936
DNA (1254bp) protein (418aa)
hypothetical protein n=1 Tax=Novosphingobium nitrogenifigens RepID=UPI000318B9D6
Phytoene desaturase {ECO:0000313|EMBL:GAO55495.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium
squalene-associated FAD-dependent desaturase
SCNpilot_cont_300_bf_scaffold_1067_15
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13990..14763
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037C3E16 rbh
Sphingomonas taxi strain 30a NODE_28, whole genome shotgun sequence {ECO:0000313|EMBL:KIU28311.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
NUDIX hydrolase
SCNpilot_cont_300_bf_scaffold_1067_16
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14874..15425)
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CB517 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP70621.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
SCNpilot_cont_300_bf_scaffold_1067_17
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15624..18125)
DNA (2502bp) protein (834aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00035C66D4
Sphingomonas taxi strain 30a NODE_54, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26742.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1067_18
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18125..18526)
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI0003625869
hypothetical protein
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
SCNpilot_cont_300_bf_scaffold_1067_19
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18523..19428)
DNA (906bp) protein (302aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI0003790603
Sphingomonas taxi strain 30a NODE_54, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26743.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
Type IV secretory pathway VirJ component-like protein
SCNpilot_cont_300_bf_scaffold_1067_20
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19612..20373
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B446BE rbh
protein ImuA
Protein ImuA {ECO:0000313|EMBL:AJP74622.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;
SCNpilot_cont_300_bf_scaffold_1067_21
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20483..22255
DNA (1773bp) protein (591aa)
protein ImuB n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CCFAF
protein ImuB
Protein ImuB {ECO:0000313|EMBL:AJP74621.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;
SCNpilot_cont_300_bf_scaffold_1067_22
Kirrobacter mercurialis, Kirrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22327..25695
DNA (3369bp) protein (1123aa)
Error-prone DNA polymerase {ECO:0000256|HAMAP-Rule:MF_01902}; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01902};; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Ery
dnaE2; DNA polymerase (EC:2.7.7.7)
DNA polymerase III subunit alpha n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CCFAC
SCNpilot_cont_300_bf_scaffold_1067_23
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25872..26180)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UUN6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY82019.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1067_24
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26327..27346)
DNA (1020bp) protein (340aa)
2-keto-4-pentenoate hydratase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003723966
Uncharacterized protein {ECO:0000313|EMBL:GAM00925.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas p
2-keto-4-pentenoate hydratase
SCNpilot_cont_300_bf_scaffold_1067_25
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27525..28679
DNA (1155bp) protein (385aa)
long-chain acyl-CoA dehydrogenase (EC:1.3.99.13)
acyl-CoA dehydrogenase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CD7BC rbh
Sphingomonas taxi strain 30a NODE_1, whole genome shotgun sequence {ECO:0000313|EMBL:KIU29397.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadac
SCNpilot_cont_300_bf_scaffold_1067_26
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29088..30428
DNA (1341bp) protein (447aa)
DEAD/DEAH box helicase n=1 Tax=Sphingomonas melonis RepID=UPI00037F49E0
DEAD/DEAH box helicase rbh
DEAD/DEAH box helicase {ECO:0000313|EMBL:AIT06851.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas ta
SCNpilot_cont_300_bf_scaffold_1067_27
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30613..31278)
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036ADDD1
Putative nitroreductase {ECO:0000313|EMBL:GAO39840.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas c
nitroreductase
SCNpilot_cont_300_bf_scaffold_1067_28
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31361..32545
DNA (1185bp) protein (395aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9)
acetyl-CoA acetyltransferase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036F5532 rbh
Putative acetyl-CoA acetyltransferase {ECO:0000313|EMBL:GAO39837.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="
SCNpilot_cont_300_bf_scaffold_1067_29
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32689..33471
DNA (783bp) protein (261aa)
UPI0003D03844 related cluster n=1 Tax=unknown RepID=UPI0003D03844 rbh
short-chain dehydrogenase/reductase SDR Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
short-chain dehydrogenase/reductase SDR
SCNpilot_cont_300_bf_scaffold_1067_30
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33610..34041
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003681425
thioesterase superfamily protein
Thioesterase superfamily {ECO:0000313|EMBL:ABF54859.1}; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis a
Displaying 30 items

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