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SCNpilot_cont_300_bf_scaffold_1330

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1330_1
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1431)
DNA (1431bp) protein (477aa)
Chaperone protein DnaK n=1 Tax=Sphingomonas sp. S17 RepID=F3X219_9SPHN
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP
dnaK; molecular chaperone DnaK
SCNpilot_cont_300_bf_scaffold_1330_2
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1584..2033
DNA (450bp) protein (150aa)
Putative uncharacterized protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X218_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KHA63200.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1330_3
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2030..2491
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000360DC62
Uncharacterized protein {ECO:0000313|EMBL:EZP52972.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
vgr related protein
SCNpilot_cont_300_bf_scaffold_1330_4
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2836..4149)
DNA (1314bp) protein (438aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID
adenylosuccinate lyase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0003127AD2
adenylosuccinate lyase
SCNpilot_cont_300_bf_scaffold_1330_5
Erythrobacter longus, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4228..4758)
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Blastomonas sp. AAP53 RepID=UPI00030BCAEE
GCN5 family acetyltransferase {ECO:0000313|EMBL:KEO88995.1}; TaxID=1044 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythroba
N-acetyltransferase GCN5
SCNpilot_cont_300_bf_scaffold_1330_6
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4909..6345
DNA (1437bp) protein (479aa)
aldehyde dehydrogenase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037C8620
Putative succinate-semialdehyde dehydrogenase {ECO:0000313|EMBL:GAL99533.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;"
aldehyde dehydrogenase
SCNpilot_cont_300_bf_scaffold_1330_7
Hyphomonas johnsonii, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6388..7539)
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7Y4P1_9RHIZ rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KCZ92131.1}; TaxID=1280950 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas johnsonii
putative acyl-CoA dehydrogenase
SCNpilot_cont_300_bf_scaffold_1330_8
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7536..8510)
DNA (975bp) protein (325aa)
Putative acyl-CoA dehydrogenase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AYM0_AZOBR
Uncharacterized protein {ECO:0000313|EMBL:KJR64485.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum th
putative acyl-CoA dehydrogenase
SCNpilot_cont_300_bf_scaffold_1330_9
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8588..9313
DNA (726bp) protein (242aa)
metallophosphoesterase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000361E479
Calcineurin-like phosphoesterase family protein {ECO:0000313|EMBL:EZP57291.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;
metallophosphoesterase
SCNpilot_cont_300_bf_scaffold_1330_10
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9310..10287
DNA (978bp) protein (326aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=1549858 species="Bacteria; Proteobacte
riboflavin biosynthesis protein RibF n=1 Tax=Sphingomonas melonis RepID=UPI0003764C99 rbh
riboflavin biosynthesis protein RibF
SCNpilot_cont_300_bf_scaffold_1330_11
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10494..13325
DNA (2832bp) protein (944aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0
ileS; isoleucine--tRNA ligase (EC:6.1.1.5)
Isoleucine--tRNA ligase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G379_NOVAD
SCNpilot_cont_300_bf_scaffold_1330_12
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13325..13828
DNA (504bp) protein (168aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal pep
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003725DC0
peptidase A8
SCNpilot_cont_300_bf_scaffold_1330_13
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13828..14016
DNA (189bp) protein (63aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI000367E709
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIT06390.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas t
SCNpilot_cont_300_bf_scaffold_1330_14
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14013..14162
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0I480_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB04429.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium bad
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1330_15
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14277..15473)
DNA (1197bp) protein (399aa)
Cystathionine beta-lyase {ECO:0000313|EMBL:EZP54848.1}; EC=4.4.1.8 {ECO:0000313|EMBL:EZP54848.1};; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
cystathionine beta-lyase (EC:4.4.1.8) rbh
cystathionine beta-lyase n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI0002889195
SCNpilot_cont_300_bf_scaffold_1330_16
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15470..16306)
DNA (837bp) protein (279aa)
sseA; 3-mercaptopyruvate sulfurtransferase (EC:2.8.1.2)
3-mercaptopyruvate sulfurtransferase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CD6DB
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.
SCNpilot_cont_300_bf_scaffold_1330_17
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16401..16763
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Sphingomonas wittichii RepID=UPI0002DE8C1A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ70158.1}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" sour
SCNpilot_cont_300_bf_scaffold_1330_18
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16849..17292
DNA (444bp) protein (148aa)
NADPH-dependent 7-cyano-7-deazaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00818, ECO:0000256|SAAS:SAAS00184002}; EC=1.7.1.13 {ECO:0000256|HAMAP-Rule:MF_00818, ECO:0000256|SAAS:SAAS00001352};; 7-cyan
NADPH-dependent 7-cyano-7-deazaguanine reductase n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VCV3_SPHWW
7-cyano-7-deazaguanine reductase
SCNpilot_cont_300_bf_scaffold_1330_19
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17443..19701
DNA (2259bp) protein (753aa)
glycosyl transferase family 1 n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B449D8
glycosyl transferase family 1
Glycosyl transferase family 1 {ECO:0000313|EMBL:AIT06385.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingom
SCNpilot_cont_300_bf_scaffold_1330_20
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19745..20419
DNA (675bp) protein (225aa)
glycosidase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B2E3F0
glycosidase
Glycosidase {ECO:0000313|EMBL:AJP73780.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCNpilot_cont_300_bf_scaffold_1330_21
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20445..20978
DNA (534bp) protein (178aa)
glycosidase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003748F6D
DNA, contig: SP617 {ECO:0000313|EMBL:GAN13333.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
glycosidase
SCNpilot_cont_300_bf_scaffold_1330_22
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21038..23002)
DNA (1965bp) protein (655aa)
peptide transporter n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI000289D47D
Peptide transporter {ECO:0000313|EMBL:KHK90722.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium
OPT family oligopeptide transporter
SCNpilot_cont_300_bf_scaffold_1330_23
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23107..24393
DNA (1287bp) protein (429aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomo
homoserine dehydrogenase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B754C6
homoserine dehydrogenase
SCNpilot_cont_300_bf_scaffold_1330_24
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24496..24834)
DNA (339bp) protein (113aa)
transmembrane signal peptide protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI0003646BD6
Uncharacterized protein {ECO:0000313|EMBL:EKU73934.1}; TaxID=883163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yano
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1330_25
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24889..25101)
DNA (213bp) protein (71aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003767378
primase
Primase {ECO:0000313|EMBL:AIT07029.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCNpilot_cont_300_bf_scaffold_1330_26
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25158..26390)
DNA (1233bp) protein (411aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI000377CEDE rbh
Drug resistance transporter, Bcr/CflA subfamily protein {ECO:0000313|EMBL:EZP55539.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphing
major facilitator transporter
SCNpilot_cont_300_bf_scaffold_1330_27
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26529..27206)
DNA (678bp) protein (226aa)
Monofunctional biosynthetic peptidoglycan transglycosylase {ECO:0000256|SAAS:SAAS00055690}; EC=2.4.-.- {ECO:0000256|SAAS:SAAS00279069};; EC=2.4.2.- {ECO:0000256|SAAS:SAAS00055699};; TaxID=1549858 spec
Monofunctional biosynthetic peptidoglycan transglycosylase n=1 Tax=Sphingomonas sp. S17 RepID=F3WV52_9SPHN rbh
peptidoglycan transglycosylase
SCNpilot_cont_300_bf_scaffold_1330_28
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27292..28194)
DNA (903bp) protein (301aa)
RNA polymerase sigma 70 n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B5E1DB
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacter
RNA polymerase sigma 70
SCNpilot_cont_300_bf_scaffold_1330_29
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28262..28666)
DNA (405bp) protein (135aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomon
ribosomal large subunit pseudouridine synthase D n=1 Tax=Sphingomonas echinoides RepID=UPI00026CB948
pseudouridine synthase
SCNpilot_cont_300_bf_scaffold_1330_30
unknown

Not on your lists

28777..29163
DNA (387bp) protein (129aa)

This feature has no annotations

Displaying items 1-30 of 41 in total

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