ggKbase home page

SCNpilot_cont_300_bf_scaffold_1588

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1588_1
Sphingomonas sp. A4, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(150..539)
DNA (390bp) protein (130aa)
transposase n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262C0A3
Putative transposase {ECO:0000313|EMBL:BAE93946.1}; TaxID=223555 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. A
Transposase
SCNpilot_cont_300_bf_scaffold_1588_2
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1138..1974)
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI000287B97C
Uncharacterized protein {ECO:0000313|EMBL:KDM66609.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1588_3
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2159..2965
DNA (807bp) protein (269aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EKA3_9SPHN
universal stress protein UspA
Uncharacterized protein {ECO:0000313|EMBL:EHJ58272.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
SCNpilot_cont_300_bf_scaffold_1588_4
Pararhodospirillum photometricum, Pararhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2991..3821
DNA (831bp) protein (277aa)
Universal stress protein UspA and related nucleotide-binding proteins n=1 Tax=Rhodospirillum photometricum DSM 122 RepID=H6SNV7_RHOPH
Universal stress protein UspA and related nucleotide-binding proteins
Universal stress protein UspA and related nucleotide-binding proteins {ECO:0000313|EMBL:CCG07029.1}; TaxID=1150469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospiril
SCNpilot_cont_300_bf_scaffold_1588_5
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3827..5380
DNA (1554bp) protein (518aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00036B475D
CHAD domain-containing protein {ECO:0000313|EMBL:KKC27846.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingom
CHAD domain-containing protein
SCNpilot_cont_300_bf_scaffold_1588_6
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5414..5818)
DNA (405bp) protein (135aa)
Natural resistance-associated macrophage protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V703_9RHIZ
Natural resistance-associated macrophage protein {ECO:0000313|EMBL:ENN86827.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium
natural resistance-associated macrophage protein
SCNpilot_cont_300_bf_scaffold_1588_7
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5916..6152)
DNA (237bp) protein (79aa)
RND family efflux transporter MFP subunit n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IDW7_9SPHN
RND family efflux transporter MFP subunit
RND family efflux transporter MFP subunit {ECO:0000313|EMBL:CCA90492.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" so
SCNpilot_cont_300_bf_scaffold_1588_8
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6233..7033)
DNA (801bp) protein (267aa)
UspA domain-containing protein n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CAC7B rbh
Uncharacterized protein {ECO:0000313|EMBL:AHE52320.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
UspA domain-containing protein
SCNpilot_cont_300_bf_scaffold_1588_9
unknown

Not on your lists

7318..7650
DNA (333bp) protein (111aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1588_10
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7895..8791
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Sandarakinorhabdus sp. AAP62 RepID=UPI00031590BA
Transcriptional regulator, AraC family {ECO:0000313|EMBL:KGB53425.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source=
AraC family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_1588_11
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9354..9830
DNA (477bp) protein (159aa)
transcriptional regulator n=1 Tax=Sphingomonas echinoides RepID=UPI00026CA110
response regulator
Response regulator {ECO:0000313|EMBL:CDG83663.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium
SCNpilot_cont_300_bf_scaffold_1588_12
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10019..10330)
DNA (312bp) protein (104aa)
response regulator n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003A91488
hypothetical protein
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain protein {ECO:0000313|EMBL:KGB58533.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sph
SCNpilot_cont_300_bf_scaffold_1588_13
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10553..11182
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000363262B
hypothetical protein
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:ABZ69762.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="
SCNpilot_cont_300_bf_scaffold_1588_14
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11182..12444
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0I4D9_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KGB53142.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1588_15
unknown

Not on your lists

comp(12396..12656)
DNA (261bp) protein (87aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1588_16
unknown

Not on your lists

comp(13111..13386)
DNA (276bp) protein (92aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1588_17
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13669..14439)
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RGJ1_PHEZH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJA10100.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis f
SCNpilot_cont_300_bf_scaffold_1588_18
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14442..14810)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0GKZ1_9SPHN
Putative secreted protein
Uncharacterized protein Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
SCNpilot_cont_300_bf_scaffold_1588_19
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14881..15558)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Oxytricha trifallax RepID=J9F9L7_9SPIT
carbohydrate kinase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
Putative secreted protein
SCNpilot_cont_300_bf_scaffold_1588_20
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15929..16765
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MHT4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:CCW16775.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium jap
universal stress protein family protein
SCNpilot_cont_300_bf_scaffold_1588_21
unknown

Not on your lists

16781..17374
DNA (594bp) protein (198aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1588_22
unknown

Not on your lists

17441..17656
DNA (216bp) protein (72aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1588_23
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17637..18263
DNA (627bp) protein (209aa)
Cytochrome B561 n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VE53_CAUST
cytochrome b561
Cytochrome B561 {ECO:0000313|EMBL:ADG08876.1}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain
SCNpilot_cont_300_bf_scaffold_1588_24
unknown

Not on your lists

18273..18407
DNA (135bp) protein (45aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1588_25
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18404..19909
DNA (1506bp) protein (502aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0GEG7_9SPHN rbh
Carboxylic ester hydrolase {ECO:0000313|EMBL:EXS68965.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium
erythromycin esterase
SCNpilot_cont_300_bf_scaffold_1588_26
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20156..20482
DNA (327bp) protein (109aa)
Blr4652 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89L96_BRADU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAR62118.1}; TaxID=1355477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium di
SCNpilot_cont_300_bf_scaffold_1588_27
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20479..20727
DNA (249bp) protein (83aa)
nitroreductase n=1 Tax=Pseudomonas mandelii RepID=UPI00037197D0
Nitroreductase {ECO:0000313|EMBL:EXF94486.1}; TaxID=1042209 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens HK
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1588_28
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20805..21464
DNA (660bp) protein (220aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F1E4BE
Putative phosphoribosyl transferase {ECO:0000313|EMBL:AKH42120.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" sou
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1588_29
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21461..22138
DNA (678bp) protein (226aa)
phosphoribosyltransferase n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003A14E27
Phosphoribosyltransferase {ECO:0000313|EMBL:EXS68963.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium s
phosphoribosyltransferase
SCNpilot_cont_300_bf_scaffold_1588_30
unknown

Not on your lists

22250..22453
DNA (204bp) protein (68aa)

This feature has no annotations

Displaying items 1-30 of 34 in total

View Taxonomy