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SCNpilot_cont_300_bf_scaffold_1655

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1655_1
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..452
DNA (450bp) protein (150aa)
leuC; isopropylmalate isomerase large subunit; K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
3-isopropylmalate dehydratase large subunit n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WAA0_9SPHN
leuC; isopropylmalate isomerase large subunit
SCNpilot_cont_300_bf_scaffold_1655_2
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(572..1129)
DNA (558bp) protein (186aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate is
3-isopropylmalate dehydratase small subunit (EC:4.2.1.33)
Isopropylmalate isomerase small subunit n=1 Tax=Sphingopyxis sp. MC1 RepID=N9VYP6_9SPHN
SCNpilot_cont_300_bf_scaffold_1655_3
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1126..1548)
DNA (423bp) protein (141aa)
MarR family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UPK4_9SPHN
Transcriptional regulator of marR family {ECO:0000313|EMBL:GAO55023.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" so
MarR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_1655_4
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1660..2580
DNA (921bp) protein (307aa)
hydroxymethylglutaryl-CoA lyase (EC:4.1.3.4)
Hydroxymethylglutaryl-CoA lyase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UX19_9SPHN
Hydroxymethylglutaryl-CoA lyase {ECO:0000313|EMBL:ENY83000.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphing
SCNpilot_cont_300_bf_scaffold_1655_5
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2625..3752
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9VYQ1_9SPHN rbh
Alpha/beta hydrolase {ECO:0000313|EMBL:KGB58651.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp.
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1655_6
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3758..4762
DNA (1005bp) protein (335aa)
Aminoglycoside phosphotransferase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W9J2_9SPHN
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:ENY80383.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphi
aminoglycoside phosphotransferase
SCNpilot_cont_300_bf_scaffold_1655_7
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4759..6060
DNA (1302bp) protein (434aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000
eno1; Enolase (EC:4.2.1.11)
Enolase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UPW1_9SPHN
SCNpilot_cont_300_bf_scaffold_1655_8
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6060..6974
DNA (915bp) protein (305aa)
D-3-phosphoglycerate dehydrogenase SerA3 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UPK9_9SPHN
lactate dehydrogenase-like oxidoreductase Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
D-3-phosphoglycerate dehydrogenase
SCNpilot_cont_300_bf_scaffold_1655_9
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6974..7672
DNA (699bp) protein (233aa)
Beta-ketoadipate enol-lactone hydrolase {ECO:0000313|EMBL:GAO55029.1}; EC=3.1.1.24 {ECO:0000313|EMBL:GAO55029.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadale
Alpha/beta hydrolase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WAA8_9SPHN
alpha/beta hydrolase fold protein
SCNpilot_cont_300_bf_scaffold_1655_10
Alcanivorax dieselolei, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7690..8472
DNA (783bp) protein (261aa)
short-chain dehydrogenase n=1 Tax=Sphingobium sp. YL23 RepID=UPI00039BCFB4
oxidoreductase
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:AFT71122.1}; TaxID=930169 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracace
SCNpilot_cont_300_bf_scaffold_1655_11
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8483..8977)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UPW4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KGB53229.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1655_12
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9083..11302
DNA (2220bp) protein (740aa)
TonB-dependent receptor n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UPL3_9SPHN
TonB-dependent receptor {ECO:0000313|EMBL:ENY80390.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
TonB-dependent receptor
SCNpilot_cont_300_bf_scaffold_1655_13
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11443..12219)
DNA (777bp) protein (259aa)
Short-chain dehydrogenase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W9J9_9SPHN rbh
Conserved Putative membrane protein
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
SCNpilot_cont_300_bf_scaffold_1655_14
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12298..12690
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WAB7_9SPHN
Ketosteroid isomerase-related protein {ECO:0000313|EMBL:KGB53223.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1655_15
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12706..13362
DNA (657bp) protein (219aa)
Transposase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9VYR4_9SPHN rbh
hypothetical protein
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
SCNpilot_cont_300_bf_scaffold_1655_16
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13481..14098
DNA (618bp) protein (206aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UPM3_9SPHN
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ENY80400.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyx
glyoxalase/bleomycin resistance protein/dioxygenase
Displaying 16 items

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