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SCNpilot_cont_300_bf_scaffold_1956

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1956_1
unknown

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comp(118..231)
DNA (114bp) protein (38aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1956_2
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1180..1932)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0H2W0_9SPHN rbh
Short chain dehydrogenase {ECO:0000313|EMBL:EZP74230.1}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas p
short chain dehydrogenase rbh
SCNpilot_cont_300_bf_scaffold_1956_3
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2406..2789
DNA (384bp) protein (128aa)
response regulator receiver n=1 Tax=Sphingobium sp. YL23 RepID=UPI00039CC376
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ACF03493.1}; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhod
SCNpilot_cont_300_bf_scaffold_1956_4
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3197..5719)
DNA (2523bp) protein (841aa)
TonB-denpendent receptor n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CCA93 rbh
Sphingomonas taxi strain 30a NODE_19, whole genome shotgun sequence {ECO:0000313|EMBL:KIU29690.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
TonB-dependent receptor
SCNpilot_cont_300_bf_scaffold_1956_5
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5743..6480)
DNA (738bp) protein (246aa)
Acid phosphatase {ECO:0000256|PIRNR:PIRNR000897}; EC=3.1.3.2 {ECO:0000256|PIRNR:PIRNR000897};; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae;
PA-phosphatase-like protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8VTP7_9SPHN
PA-phosphatase-like protein
SCNpilot_cont_300_bf_scaffold_1956_6
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6508..7539)
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8W2V7_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EJU14026.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
gluconolactonase
SCNpilot_cont_300_bf_scaffold_1956_7
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7668..8378)
DNA (711bp) protein (237aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae
Sensory transduction histidine kinase n=1 Tax=Sphingomonas sp. LH128 RepID=J8VMP4_9SPHN
sensory transduction histidine kinase
SCNpilot_cont_300_bf_scaffold_1956_8
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8426..8977)
DNA (552bp) protein (184aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae
Sensory transduction histidine kinase n=1 Tax=Sphingomonas sp. LH128 RepID=J8VMP4_9SPHN
SCNpilot_cont_300_bf_scaffold_1956_9
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8970..9644)
DNA (675bp) protein (225aa)
Two component transcriptional regulator n=1 Tax=Sphingomonas sp. LH128 RepID=J8W152_9SPHN
Two component transcriptional regulator {ECO:0000313|EMBL:EJU14028.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source=
two component transcriptional regulator
SCNpilot_cont_300_bf_scaffold_1956_10
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9824..12070
DNA (2247bp) protein (749aa)
TonB-dependent receptor n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GVG6_SPHAL
Putative TonB-dependent receptor {ECO:0000313|EMBL:GAO38090.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphin
TonB-dependent receptor
SCNpilot_cont_300_bf_scaffold_1956_11
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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12317..12541
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LVM9_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB75297.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
SCNpilot_cont_300_bf_scaffold_1956_12
unknown

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12504..13106
DNA (603bp) protein (201aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1956_13
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13467..14144
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Oxytricha trifallax RepID=J9F9L7_9SPIT
carbohydrate kinase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
Putative secreted protein
SCNpilot_cont_300_bf_scaffold_1956_14
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14219..14584
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0GKZ1_9SPHN
Putative secreted protein
Uncharacterized protein Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
SCNpilot_cont_300_bf_scaffold_1956_15
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14587..15357
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RGJ1_PHEZH
Peptidase C39 {ECO:0000313|EMBL:KGB53140.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1956_16
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15354..15989
DNA (636bp) protein (212aa)
Uncharacterized protein {ECO:0000313|EMBL:KGB58530.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1956_17
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16011..17312)
DNA (1302bp) protein (434aa)
Uncharacterized protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0I4D9_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJA10102.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis f
SCNpilot_cont_300_bf_scaffold_1956_18
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17312..17941)
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000363262B
fixK; transcriptional regulator FixK
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:ABZ69762.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="
Displaying 18 items

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