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SCNpilot_cont_300_bf_scaffold_428

Search features with annotation key words

Displaying items 1-30 of 133 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_428_1
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..172
DNA (171bp) protein (57aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI00028A3E7E
DNA, contig: SP668 {ECO:0000313|EMBL:GAN15838.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
hypothetical protein
SCNpilot_cont_300_bf_scaffold_428_2
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

245..691
DNA (447bp) protein (149aa)
Uncharacterized protein n=2 Tax=Sphingomonadaceae RepID=K9CLA2_SPHYA
Uncharacterized protein {ECO:0000313|EMBL:EKU72658.1}; TaxID=883163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yano
hypothetical protein
SCNpilot_cont_300_bf_scaffold_428_3
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1018..1365
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CDB01
Uncharacterized protein {ECO:0000313|EMBL:AJR25301.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp.
hypothetical protein
SCNpilot_cont_300_bf_scaffold_428_4
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1843..2991
DNA (1149bp) protein (383aa)
Transporter n=1 Tax=Sphingobium baderi LL03 RepID=T0GVT9_9SPHN rbh
Transporter {ECO:0000313|EMBL:EXS70592.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. Ant17.;"
outer membrane efflux protein
SCNpilot_cont_300_bf_scaffold_428_5
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2988..4202
DNA (1215bp) protein (405aa)
RND transporter n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI000289F5F5
Cation efflux system protein CusB {ECO:0000313|EMBL:GAD49699.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="N
copper efflux system membrane protein CusB
SCNpilot_cont_300_bf_scaffold_428_6
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4130..5212)
DNA (1083bp) protein (361aa)
Putative uncharacterized protein Tax=RBG_16_Gamma2_60_9_curated
Putative uncharacterized protein id=4588905 bin=GWC2_Elusimicrobia_64_44 species=Brevundimonas diminuta genus=Brevundimonas taxon_order=Caulobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
SCNpilot_cont_300_bf_scaffold_428_7
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6530..7252
DNA (723bp) protein (241aa)
cation transporter n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CD22A
heavy metal efflux pump CzcA; K07787 Cu(I)/Ag(I) efflux system membrane protein CusA Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
heavy metal efflux pump CzcA
SCNpilot_cont_300_bf_scaffold_428_8
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7570..10062
DNA (2493bp) protein (831aa)
Vitamin K epoxide reductase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GQ11_SPHAL
Vitamin K epoxide reductase {ECO:0000313|EMBL:ABF54261.1}; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxi
vitamin K epoxide reductase
SCNpilot_cont_300_bf_scaffold_428_9
unknown

Not on your lists

10117..10317
DNA (201bp) protein (67aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_428_10
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10365..10889)
DNA (525bp) protein (175aa)
Iron permease FTR1 family protein n=2 Tax=Sphingomonadaceae RepID=F3X356_9SPHN
DNA, contig: SP668 {ECO:0000313|EMBL:GAN15829.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
iron permease FTR1
SCNpilot_cont_300_bf_scaffold_428_11
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13573..14103
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9D0Y1_SPHYA
DNA, contig: SP643 {ECO:0000313|EMBL:GAN14519.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
hypothetical protein
SCNpilot_cont_300_bf_scaffold_428_12
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14927..16240
DNA (1314bp) protein (438aa)
type II restriction enzyme NmeDIP n=1 Tax=Sphingomonas melonis RepID=UPI000367A04F
Sphingomonas taxi strain 30a NODE_16, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26885.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
hypothetical protein
SCNpilot_cont_300_bf_scaffold_428_13
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16305..17189
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00035E1666
DNA, contig: SP670 {ECO:0000313|EMBL:GAN15869.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
hypothetical protein
SCNpilot_cont_300_bf_scaffold_428_14
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17275..17607
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9D506_SPHYA
Uncharacterized protein {ECO:0000313|EMBL:EKU72665.1}; TaxID=883163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yano
hypothetical protein
SCNpilot_cont_300_bf_scaffold_428_15
unknown

Not on your lists

17923..18153
DNA (231bp) protein (77aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_428_16
unknown

Not on your lists

18433..18606
DNA (174bp) protein (58aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_428_17
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18875..19120)
DNA (246bp) protein (82aa)
membrane protein n=1 Tax=Sphingomonas melonis RepID=UPI00036D1C93
DNA, contig: SP668 {ECO:0000313|EMBL:GAN15831.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
glutaredoxin
SCNpilot_cont_300_bf_scaffold_428_18
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19289..19534
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MK33_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:CCW17099.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium jap
Transposase-like protein
SCNpilot_cont_300_bf_scaffold_428_19
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19566..20987)
DNA (1422bp) protein (474aa)
transposase IS66 n=1 Tax=Sphingobium xenophagum RepID=UPI000363D7A4
Mobile element protein {ECO:0000313|EMBL:EZP79889.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi
hypothetical protein
SCNpilot_cont_300_bf_scaffold_428_20
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20992..22191
DNA (1200bp) protein (400aa)
Mobile element protein n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MJC8_9SPHN rbh
Mobile element protein {ECO:0000313|EMBL:CCW17315.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japo
transposase for insertion sequence element ISRM3
SCNpilot_cont_300_bf_scaffold_428_21
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22181..22537)
DNA (357bp) protein (119aa)
transposase IS66 n=1 Tax=Sphingobium xenophagum RepID=UPI00035FD2D9
Mobile element protein {ECO:0000313|EMBL:EZP79889.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi
hypothetical protein
SCNpilot_cont_300_bf_scaffold_428_22
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22609..22950)
DNA (342bp) protein (114aa)
IS66 Orf2 family protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VHC5_SPHWW
IS66 Orf2 family protein
IS66 Orf2 family protein {ECO:0000313|EMBL:ABQ71691.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas w
SCNpilot_cont_300_bf_scaffold_428_23
alpha proteobacterium JLT2015, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22947..23231)
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00036ED299
transposase
Transposase IS3/IS911 {ECO:0000313|EMBL:EMD81576.1}; TaxID=1234595 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium JLT2015.;"
SCNpilot_cont_300_bf_scaffold_428_24
unknown

Not on your lists

comp(23367..23621)
DNA (255bp) protein (85aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_428_25
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23697..24869)
DNA (1173bp) protein (391aa)
UPI0003D634E3 related cluster n=1 Tax=unknown RepID=UPI0003D634E3
Sodium/hydrogen exchanger {ECO:0000313|EMBL:ETI62698.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium s
sodium/calcium exchanger membrane region
SCNpilot_cont_300_bf_scaffold_428_26
Brevundimonas sp. EAKA, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24880..25227)
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026C9BE8
Uncharacterized protein {ECO:0000313|EMBL:KDP94882.1}; TaxID=1495854 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas s
hypothetical protein
SCNpilot_cont_300_bf_scaffold_428_27
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25500..26648)
DNA (1149bp) protein (383aa)
Transposase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HMR2_9RHIZ
Transposase {ECO:0000313|EMBL:EHK57981.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12
putative transposase
SCNpilot_cont_300_bf_scaffold_428_28
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26699..29953)
DNA (3255bp) protein (1085aa)
cation transporter n=1 Tax=Sphingomonas echinoides RepID=UPI00026C9BE9 rbh
Cation transporter {ECO:0000313|EMBL:ETI65152.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100
heavy metal efflux pump CzcA
SCNpilot_cont_300_bf_scaffold_428_29
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29957..31117)
DNA (1161bp) protein (387aa)
metal transporter n=1 Tax=Sphingomonas wittichii RepID=UPI000319E781 rbh
metal transporter rbh
Metal transporter {ECO:0000313|EMBL:KKC25598.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2
SCNpilot_cont_300_bf_scaffold_428_30
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31240..32505)
DNA (1266bp) protein (422aa)
Outer membrane efflux protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6INV8_9SPHN rbh
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:CCA93110.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosp
Displaying items 1-30 of 133 in total

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