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SCNpilot_cont_300_bf_scaffold_441

Search features with annotation key words

Displaying items 1-30 of 97 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_441_1
unknown

Not on your lists

3..191
DNA (189bp) protein (63aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_441_2
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

267..1052
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI000365589B rbh
Sphingomonas taxi strain 30a NODE_12, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26233.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
2-keto-4-pentenoate hydratase
SCNpilot_cont_300_bf_scaffold_441_3
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1115..2383
DNA (1269bp) protein (423aa)
hexuranate MFS transporter n=1 Tax=Sphingomonas melonis RepID=UPI00035FB605 rbh
Sphingomonas taxi strain 30a NODE_12, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26232.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
major facilitator transporter
SCNpilot_cont_300_bf_scaffold_441_4
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2396..6163
DNA (3768bp) protein (1256aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00035DD38E rbh
Sphingomonas taxi strain 30a NODE_12, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26231.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
hypothetical protein
SCNpilot_cont_300_bf_scaffold_441_5
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6163..7374
DNA (1212bp) protein (404aa)
hypothetical protein n=2 Tax=Sphingomonas melonis RepID=UPI00036BA1E9 rbh
Sphingomonas taxi strain 30a NODE_12, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26230.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
hypothetical protein
SCNpilot_cont_300_bf_scaffold_441_6
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7396..7839
DNA (444bp) protein (148aa)
UPI0003D5D425 related cluster n=1 Tax=unknown RepID=UPI0003D5D425
cupin Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
cupin
SCNpilot_cont_300_bf_scaffold_441_7
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7855..8670)
DNA (816bp) protein (272aa)
ferredoxin--NADP reductase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B5D30A rbh
ferredoxin-NADP reductase
Ferredoxin-NADP reductase {ECO:0000313|EMBL:AJP71086.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas
SCNpilot_cont_300_bf_scaffold_441_8
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8673..9095)
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B734F3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJA10305.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis f
SCNpilot_cont_300_bf_scaffold_441_9
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9118..10110)
DNA (993bp) protein (331aa)
hypothetical protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002489772 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP72080.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
SCNpilot_cont_300_bf_scaffold_441_10
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10126..12396)
DNA (2271bp) protein (757aa)
TonB-denpendent receptor n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002489771 rbh
TonB-dependent receptor-like protein {ECO:0000313|EMBL:KGB57672.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="S
TonB-dependent receptor-like protein
SCNpilot_cont_300_bf_scaffold_441_11
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12816..14288)
DNA (1473bp) protein (491aa)
Putative succinate-semialdehyde dehydrogenase [NADP+] n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=A9HPW5_GLUDA
gabD; succinate-semialdehyde dehydrogenase
Putative succinate-semialdehyde dehydrogenase [NADP+] {ECO:0000313|EMBL:CAP56641.1}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacet
SCNpilot_cont_300_bf_scaffold_441_12
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14285..15049)
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002D945FF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACI50697.1}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconaceto
SCNpilot_cont_300_bf_scaffold_441_13
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15078..15815)
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002E2E0C8
Uridine phosphorylase {ECO:0000313|EMBL:GAK72986.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" so
purine or other phosphorylase family 1
SCNpilot_cont_300_bf_scaffold_441_14
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15842..16615)
DNA (774bp) protein (258aa)
PfkB domain protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T4E3_CAUSK
ribokinase-like domain-containing protein
PfkB domain protein {ECO:0000313|EMBL:ABZ69443.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strai
SCNpilot_cont_300_bf_scaffold_441_15
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(16612..17202)
DNA (591bp) protein (197aa)
isochorismatase hydrolase id=14632590 bin=bin9_gal15 species=Pseudaminobacter salicylatoxidans genus=Pseudaminobacter taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
isochorismatase hydrolase Tax=CSP1_3_Armatimonadetes
isochorismatase rutB
SCNpilot_cont_300_bf_scaffold_441_16
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17202..17984)
DNA (783bp) protein (261aa)
Transcriptional regulator, GntR family n=2 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=B5ZFE0_GLUDA
GntR family transcriptional regulator
Putative transcriptional regulator, GntR family {ECO:0000313|EMBL:CAP56632.1}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacte
SCNpilot_cont_300_bf_scaffold_441_17
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18122..20389
DNA (2268bp) protein (756aa)
TonB-dependent receptor n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V6I1_SPHWW
TonB-dependent receptor {ECO:0000313|EMBL:EZP72772.1}; Flags: Precursor;; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" sourc
TonB-dependent receptor
SCNpilot_cont_300_bf_scaffold_441_18
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20408..21565
DNA (1158bp) protein (386aa)
Transporter, major facilitator family n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S023_9GAMM
Transporter, major facilitator family {ECO:0000313|EMBL:EEB78061.1}; TaxID=247634 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="marine gamma proteobacterium
major facilitator transporter
SCNpilot_cont_300_bf_scaffold_441_19
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21879..23264
DNA (1386bp) protein (462aa)
GABA permease n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B36D7E rbh
Amino acid/polyamine transporter {ECO:0000313|EMBL:EGD58271.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Nov
amino acid permease-associated protein
SCNpilot_cont_300_bf_scaffold_441_20
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23288..23506
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00037C3C30
hypothetical protein
TPR domain protein {ECO:0000313|EMBL:ABC62183.1}; TaxID=314225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter lito
SCNpilot_cont_300_bf_scaffold_441_21
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24019..26712
DNA (2694bp) protein (898aa)
TonB-dependent receptor n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GQF3_SPHAL
TonB-dependent receptor Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
TonB-dependent receptor
SCNpilot_cont_300_bf_scaffold_441_22
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26726..27451
DNA (726bp) protein (242aa)
Uncharacterized conserved secreted or membrane protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GQF4_SPHAL rbh
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_441_23
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27448..28182
DNA (735bp) protein (245aa)
hypothetical protein n=1 Tax=Sphingomonas wittichii RepID=UPI000308E38C
Uncharacterized protein {ECO:0000313|EMBL:EXS70515.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp.
PepSY-associated TM helix family protein
SCNpilot_cont_300_bf_scaffold_441_24
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28184..28987)
DNA (804bp) protein (268aa)
Transcriptional regulator, histidine utilization repressor, GntR family n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GQF6_SPHAL
Uncharacterized protein {ECO:0000313|EMBL:EXS70514.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp.
histidine utilization repressor
SCNpilot_cont_300_bf_scaffold_441_25
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29013..29567)
DNA (555bp) protein (185aa)
TonB-like protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S638_9SPHN
TonB-like protein
TonB-like protein {ECO:0000313|EMBL:AGH49954.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1
SCNpilot_cont_300_bf_scaffold_441_26
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29738..31957)
DNA (2220bp) protein (740aa)
TonB-dependent siderophore receptor n=1 Tax=Sphingomonas sp. LH128 RepID=J8VYS9_9SPHN rbh
TonB-dependent siderophore receptor {ECO:0000313|EMBL:EZP70906.1}; Flags: Precursor;; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphi
TonB-dependent siderophore receptor
SCNpilot_cont_300_bf_scaffold_441_27
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32242..32916
DNA (675bp) protein (225aa)
UPI0003D60B1D related cluster n=1 Tax=unknown RepID=UPI0003D60B1D
Sphingomonas taxi strain 30a NODE_7, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26030.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadac
response regulator
SCNpilot_cont_300_bf_scaffold_441_28
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33047..33445
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Phyllobacterium sp. YR531 RepID=J3CFU7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJN04939.1}; Flags: Precursor;; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" sour
Hypothetical protein
SCNpilot_cont_300_bf_scaffold_441_29
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33583..35832
DNA (2250bp) protein (750aa)
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I7Z7A2_9GAMM rbh
Methyltransferase {ECO:0000313|EMBL:KKC24802.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2
putative methyltransferase, chemotaxis regulator rbh
SCNpilot_cont_300_bf_scaffold_441_30
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35829..36764)
DNA (936bp) protein (312aa)
Putative Chemotaxis glutamate methylesterase CheB-like n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZEE0_AZOL4
Uncharacterized protein {ECO:0000313|EMBL:AJR26570.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp.
putative Chemotaxis glutamate methylesterase CheB-like
Displaying items 1-30 of 97 in total

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