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SCNpilot_cont_300_bf_scaffold_473

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Displaying items 1-30 of 155 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_473_1
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..145)
DNA (144bp) protein (48aa)
cold-shock protein n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262C064
Uncharacterized protein {ECO:0000313|EMBL:GAM01119.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas p
cold-shock protein
SCNpilot_cont_300_bf_scaffold_473_2
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

512..1132
DNA (621bp) protein (207aa)
3''''-5'''' exonuclease n=1 Tax=Sphingomonas melonis RepID=UPI000380B202 rbh
Sphingomonas taxi strain 30a NODE_34, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26138.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
3'-5' exonuclease
SCNpilot_cont_300_bf_scaffold_473_3
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1125..1763
DNA (639bp) protein (213aa)
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B3CA94
Sphingomonas taxi strain 30a NODE_34, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26170.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
hypothetical protein
SCNpilot_cont_300_bf_scaffold_473_4
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1772..2347
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036EBB4E
DNA, contig: SP622 {ECO:0000313|EMBL:GAN13581.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
OstA family protein
SCNpilot_cont_300_bf_scaffold_473_5
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2411..3214
DNA (804bp) protein (268aa)
ABC transporter family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X0P8_9SPHN
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:GAM01123.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" s
ABC transporter ATP-binding protein
SCNpilot_cont_300_bf_scaffold_473_6
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3267..4712
DNA (1446bp) protein (482aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00038072DD
RNA polymerase sigma54 factor
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphin
SCNpilot_cont_300_bf_scaffold_473_7
Sphingobium sp. HDIP04, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4822..5682)
DNA (861bp) protein (287aa)
LysR family transcriptional regulator n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC9BB
LysR family transcriptional regulator {ECO:0000313|EMBL:EQB05430.1}; TaxID=428994 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sp
LysR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_473_8
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5812..7308
DNA (1497bp) protein (499aa)
methylmalonate-semialdehyde dehydrogenase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037AFADE
Sphingomonas taxi strain 30a NODE_28, whole genome shotgun sequence {ECO:0000313|EMBL:KIU28331.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
methylmalonate-semialdehyde dehydrogenase
SCNpilot_cont_300_bf_scaffold_473_9
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7418..7726)
DNA (309bp) protein (103aa)
Excinuclease ABC, C subunit domain protein n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MQD0_9SPHN
Excinuclease ABC, C subunit domain protein {ECO:0000313|EMBL:CCW19430.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" sour
putative endonuclease
SCNpilot_cont_300_bf_scaffold_473_10
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7827..8972
DNA (1146bp) protein (382aa)
Acyl-CoA dehydrogenase; K00249 acyl-CoA dehydrogenase [EC:1.3.99.3] Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
acyl-CoA dehydrogenase n=1 Tax=Sphingomonas echinoides RepID=UPI00026C92F9 rbh
Acyl-CoA dehydrogenase
SCNpilot_cont_300_bf_scaffold_473_11
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8969..10003
DNA (1035bp) protein (345aa)
enoyl-CoA hydratase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037E293A rbh
Sphingomonas taxi strain 30a NODE_3, whole genome shotgun sequence {ECO:0000313|EMBL:KIU30135.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadac
enoyl-CoA hydratase rbh
SCNpilot_cont_300_bf_scaffold_473_12
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10122..10904
DNA (783bp) protein (261aa)
Enoyl-CoA hydratase {ECO:0000313|EMBL:ETI58983.1}; EC=4.2.1.17 {ECO:0000313|EMBL:ETI58983.1};; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae
paaG; enoyl-CoA hydratase (EC:4.2.1.17)
UPI0003D59E25 related cluster n=1 Tax=unknown RepID=UPI0003D59E25 rbh
SCNpilot_cont_300_bf_scaffold_473_13
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11091..11975
DNA (885bp) protein (295aa)
3-hydroxyisobutyrate dehydrogenase {ECO:0000256|RuleBase:RU910714}; Short=HIBADH {ECO:0000256|RuleBase:RU910714};; EC=1.1.1.31 {ECO:0000256|RuleBase:RU910714};; TaxID=1549858 species="Bacteria; Proteo
3-hydroxyisobutyrate dehydrogenase n=1 Tax=Sphingomonas melonis RepID=UPI000364C2F5
3-hydroxyisobutyrate dehydrogenase rbh
SCNpilot_cont_300_bf_scaffold_473_14
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11972..12445
DNA (474bp) protein (158aa)
nucleoside diphosphate kinase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B384E4
Nucleoside diphosphate kinase {ECO:0000313|EMBL:KHK91714.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novos
GreA/GreB family elongation factor
SCNpilot_cont_300_bf_scaffold_473_15
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12594..14201
DNA (1608bp) protein (536aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000381106C
major facilitator transporter
Major facilitator transporter {ECO:0000313|EMBL:AJP70955.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingom
SCNpilot_cont_300_bf_scaffold_473_16
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14242..15267
DNA (1026bp) protein (342aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659};; TaxID=1609977 species="Bacteria; Proteo
alanine racemase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CA63C rbh
alanine racemase
SCNpilot_cont_300_bf_scaffold_473_17
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15274..15660)
DNA (387bp) protein (129aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S394_9SPHN
Lactoylglutathione lyase and related lyases {ECO:0000313|EMBL:GAO53692.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;"
glyoxalase/bleomycin resistance protein/dioxygenase
SCNpilot_cont_300_bf_scaffold_473_18
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15657..16436)
DNA (780bp) protein (260aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9)
acetyl-CoA acetyltransferase n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI000288A05B
Acetyl-CoA acetyltransferases family protein {ECO:0000313|EMBL:EZP56519.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" s
SCNpilot_cont_300_bf_scaffold_473_19
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16883..17746)
DNA (864bp) protein (288aa)
Putative uncharacterized protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WTH8_9SPHN
Putative polyhydroxyalkanoate synthase {ECO:0000313|EMBL:GAL99895.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source=
poly-beta-hydroxybutyrate polymerase
SCNpilot_cont_300_bf_scaffold_473_20
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17761..18300
DNA (540bp) protein (180aa)
poly (3-hydroxybutyrate) depolymerase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B55ACF
Sphingomonas taxi strain 30a NODE_22, whole genome shotgun sequence {ECO:0000313|EMBL:KIU27366.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
polyhydroxyalkanoate synthesis repressor PhaR
SCNpilot_cont_300_bf_scaffold_473_21
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18425..19618)
DNA (1194bp) protein (398aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000376E8B6 rbh
Uncharacterized protein {ECO:0000313|EMBL:GAM00830.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas p
hypothetical protein rbh
SCNpilot_cont_300_bf_scaffold_473_22
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19800..21212)
DNA (1413bp) protein (471aa)
CpaF protein secretory protein kinase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00035F7E53
Type II/IV secretion system family protein {ECO:0000313|EMBL:EZP55378.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" sou
flagellar protein FlaI
SCNpilot_cont_300_bf_scaffold_473_23
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21304..22332)
DNA (1029bp) protein (343aa)
AraC family transcriptional regulator n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI0002884AD2
6-O-methylguanine DNA methyltransferase rbh
6-O-methylguanine DNA methyltransferase {ECO:0000313|EMBL:AIT06696.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source
SCNpilot_cont_300_bf_scaffold_473_24
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22351..23193
DNA (843bp) protein (281aa)
Enoyl-CoA hydratase {ECO:0000313|EMBL:GAO56285.1}; EC=4.2.1.17 {ECO:0000313|EMBL:GAO56285.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae
hypothetical protein n=1 Tax=Blastomonas sp. AAP53 RepID=UPI0002FFD5E4
enoyl-CoA hydratase/isomerase family
SCNpilot_cont_300_bf_scaffold_473_25
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23338..23907
DNA (570bp) protein (190aa)
ATP synthase subunit delta n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B3AC84
ATP synthase subunit delta
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; T
SCNpilot_cont_300_bf_scaffold_473_26
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23913..25442
DNA (1530bp) protein (510aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit a
F0F1 ATP synthase subunit alpha (EC:3.6.3.14) rbh
ATP synthase subunit alpha n=1 Tax=Sphingomonas sp. S17 RepID=F3X2U1_9SPHN rbh
SCNpilot_cont_300_bf_scaffold_473_27
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25491..25610
DNA (120bp) protein (40aa)
F0F1 ATP synthase subunit gamma n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI000289EC45
ATP synthase F0F1 subunit gamma
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=1609
SCNpilot_cont_300_bf_scaffold_473_28
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25607..26308
DNA (702bp) protein (234aa)
F0F1 ATP synthase subunit gamma n=1 Tax=Sphingomonas echinoides RepID=UPI00026C934E
ATP synthase F0F1 subunit gamma
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=1549
SCNpilot_cont_300_bf_scaffold_473_29
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26333..27802
DNA (1470bp) protein (490aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit bet
F0F1 ATP synthase subunit beta n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000364A085 rbh
ATP synthase F0F1 subunit beta
SCNpilot_cont_300_bf_scaffold_473_30
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27848..28099
DNA (252bp) protein (84aa)
AtpC protein {ECO:0000313|EMBL:KIU27354.1}; EC=3.6.3.14 {ECO:0000313|EMBL:KIU27354.1};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphin
atpC; ATP synthase F0F1 subunit epsilon (EC:3.6.3.14)
F0F1 ATP synthase subunit epsilon n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B2F2E5
Displaying items 1-30 of 155 in total

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