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SCNpilot_cont_300_bf_scaffold_512

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Displaying items 1-30 of 200 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_512_1
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..867
DNA (867bp) protein (289aa)
preprotein translocase subunit SecA n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003659CC2
preprotein translocase subunit SecA
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
SCNpilot_cont_300_bf_scaffold_512_2
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1000..1584)
DNA (585bp) protein (195aa)
Putative lipoprotein n=1 Tax=Sphingomonas sp. S17 RepID=F3WUG4_9SPHN
Putative lipoprotein {ECO:0000313|EMBL:EZP56970.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp.
hypothetical protein
SCNpilot_cont_300_bf_scaffold_512_3
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1735..4674)
DNA (2940bp) protein (980aa)
TonB-dependent receptor n=1 Tax=Sphingomonas elodea RepID=UPI0002631A59 rbh
TonB-dependent receptor {ECO:0000313|EMBL:AJP74228.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
TonB-dependent receptor rbh
SCNpilot_cont_300_bf_scaffold_512_4
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4911..5474)
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003668C42
CHAP domain protein {ECO:0000313|EMBL:EZP56944.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. R
amidase
SCNpilot_cont_300_bf_scaffold_512_5
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5629..6483)
DNA (855bp) protein (285aa)
ATPase AAA n=1 Tax=Sphingomonas melonis RepID=UPI0003602A60
ATPase AAA
ATPase AAA {ECO:0000313|EMBL:AIT05834.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCNpilot_cont_300_bf_scaffold_512_6
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6528..7328)
DNA (801bp) protein (267aa)
RNA methyltransferase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036508BF rbh
DNA, contig: SP614 {ECO:0000313|EMBL:GAN13016.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
RNA methyltransferase
SCNpilot_cont_300_bf_scaffold_512_7
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7465..7734)
DNA (270bp) protein (90aa)
HPr kinase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CB067
Sphingomonas taxi strain 30a NODE_11, whole genome shotgun sequence {ECO:0000313|EMBL:KIU29897.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
phosphate ABC transporter permease
SCNpilot_cont_300_bf_scaffold_512_8
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7731..8159)
DNA (429bp) protein (143aa)
PTS fructose transporter subunit IIA n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036B17B6
PTS fructose transporter subunit IIA {ECO:0000313|EMBL:KHA65097.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sp
PTS fructose transporter subunit IIA
SCNpilot_cont_300_bf_scaffold_512_9
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8156..9070)
DNA (915bp) protein (305aa)
nucleotide-binding protein n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI000289224B rbh
Nucleotide-binding protein BW41_03739 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" sour
nucleotide-binding protein
SCNpilot_cont_300_bf_scaffold_512_10
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9067..9486)
DNA (420bp) protein (140aa)
aldolase n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B7B784
Putative HPr kinase/phosphorylase {ECO:0000313|EMBL:GAO38439.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphi
HPr kinase
SCNpilot_cont_300_bf_scaffold_512_11
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9483..11054)
DNA (1572bp) protein (524aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadacea
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI0003639FAB
histidine kinase
SCNpilot_cont_300_bf_scaffold_512_12
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11023..11730)
DNA (708bp) protein (236aa)
Response regulator n=1 Tax=Sphingomonas sp. S17 RepID=F3WSU5_9SPHN
Putative two-component response regulator {ECO:0000313|EMBL:GAL99363.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" sour
transcriptional regulator
SCNpilot_cont_300_bf_scaffold_512_13
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11852..13462
DNA (1611bp) protein (537aa)
phosphoenolpyruvate carboxykinase n=1 Tax=Sphingomonas melonis RepID=UPI00037EA117 rbh
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:00
phosphoenolpyruvate carboxykinase [ATP]
SCNpilot_cont_300_bf_scaffold_512_14
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13532..13867
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B59480
Uncharacterized protein {ECO:0000313|EMBL:EZP54587.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
hypothetical protein
SCNpilot_cont_300_bf_scaffold_512_15
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13974..14444)
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037C9422
NfeD-like family protein {ECO:0000313|EMBL:EZP49079.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas
membrane protein
SCNpilot_cont_300_bf_scaffold_512_16
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14441..15439)
DNA (999bp) protein (333aa)
membrane protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037B4E89
Sphingomonas taxi strain 30a NODE_11, whole genome shotgun sequence {ECO:0000313|EMBL:KIU29906.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
membrane protein
SCNpilot_cont_300_bf_scaffold_512_17
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15624..17081
DNA (1458bp) protein (486aa)
inosine-5-monophosphate dehydrogenase (EC:1.1.1.205) rbh
inosine-5`-monophosphate dehydrogenase n=1 Tax=Sphingomonas melonis RepID=UPI00037B06F3 rbh
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:
SCNpilot_cont_300_bf_scaffold_512_18
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17078..18253
DNA (1176bp) protein (392aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036A330E rbh
RNA methyltransferase rbh
RNA methyltransferase {ECO:0000313|EMBL:AIT05529.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas tax
SCNpilot_cont_300_bf_scaffold_512_19
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18247..18792
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B62A52
Tetratricopeptide repeat family protein {ECO:0000313|EMBL:EZP49084.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source
TPR repeat-containing protein
SCNpilot_cont_300_bf_scaffold_512_20
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(18818..19654)
DNA (837bp) protein (279aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase
16S rRNA methyltransferase n=1 Tax=Sphingomonas melonis RepID=UPI00037FCBC2 rbh
16S rRNA methyltransferase
SCNpilot_cont_300_bf_scaffold_512_21
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19651..20646)
DNA (996bp) protein (332aa)
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosph
pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262)
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Sphingomonas sp. S17 RepID=F3WSV3_9SPHN rbh
SCNpilot_cont_300_bf_scaffold_512_22
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20658..22019)
DNA (1362bp) protein (454aa)
Chaperone SurA {ECO:0000256|SAAS:SAAS00043023}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae;
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00035E839E rbh
peptidylprolyl isomerase
SCNpilot_cont_300_bf_scaffold_512_23
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22136..24364)
DNA (2229bp) protein (743aa)
Organic solvent tolerance family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WSV5_9SPHN
LPS-assembly protein LptD {ECO:0000256|HAMAP-Rule:MF_01411, ECO:0000256|SAAS:SAAS00019908}; Flags: Precursor;; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; S
organic solvent tolerance protein
SCNpilot_cont_300_bf_scaffold_512_24
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24556..26028
DNA (1473bp) protein (491aa)
leucyl aminopeptidase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B5AB29 rbh
Probable cytosol aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucyl aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; TaxID=1470591 spec
aminopeptidase A rbh
SCNpilot_cont_300_bf_scaffold_512_25
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26614..27036
DNA (423bp) protein (141aa)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000256|HAMAP-Rule:M
ndk; phosphodiesterase (EC:2.7.4.6)
nucleoside diphosphate kinase n=1 Tax=Sphingomonas elodea RepID=UPI0001709029
SCNpilot_cont_300_bf_scaffold_512_26
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27038..27556
DNA (519bp) protein (173aa)
acetyltransferase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B6871C
acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:AIT05536.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCNpilot_cont_300_bf_scaffold_512_27
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27616..28614
DNA (999bp) protein (333aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphin
tRNA-dihydrouridine synthase n=1 Tax=Sphingomonas melonis RepID=UPI00036D95EE rbh
tRNA-dihydrouridine synthase rbh
SCNpilot_cont_300_bf_scaffold_512_28
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28614..29675
DNA (1062bp) protein (354aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121, ECO:0000313|EMBL:AJP71639.1}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphin
histidine kinase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B623A7
histidine kinase
SCNpilot_cont_300_bf_scaffold_512_29
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29672..31105
DNA (1434bp) protein (478aa)
chemotaxis protein CheY n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B330EE rbh
Nitrogen assimilation regulatory protein NtrC {ECO:0000313|EMBL:GAL99324.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;"
chemotaxis protein CheY
SCNpilot_cont_300_bf_scaffold_512_30
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31166..33400
DNA (2235bp) protein (745aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae
ATPase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B363A7 rbh
ATPase
Displaying items 1-30 of 200 in total

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