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SCNpilot_cont_300_bf_scaffold_756

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_756_1
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(174..356)
DNA (183bp) protein (61aa)
Plasmid stabilization system protein {ECO:0000313|EMBL:CCV04478.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Meso
SCNpilot_cont_300_bf_scaffold_756_2
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(563..853)
DNA (291bp) protein (97aa)
addiction module antidote protein n=1 Tax=Agrobacterium sp. 224MFTsu3.1 RepID=UPI00036E4288
Uncharacterized protein {ECO:0000313|EMBL:CCV12534.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
putative transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain
SCNpilot_cont_300_bf_scaffold_756_3
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1362..1688)
DNA (327bp) protein (109aa)
Putative DNA-binding protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J1B0_POLGS
DNA-binding protein
Putative DNA-binding protein {ECO:0000313|EMBL:ADZ68755.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9
SCNpilot_cont_300_bf_scaffold_756_4
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2005..3375)
DNA (1371bp) protein (457aa)
Integrase n=1 Tax=Sphingobium lactosutens DS20 RepID=T0IQ77_9SPHN rbh
integrase rbh
Integrase {ECO:0000313|EMBL:AJP73673.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCNpilot_cont_300_bf_scaffold_756_5
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3821..4444
DNA (624bp) protein (208aa)
Putative uncharacterized protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WTY3_9SPHN
DNA, contig: SP617 {ECO:0000313|EMBL:GAN13415.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
hypothetical protein
SCNpilot_cont_300_bf_scaffold_756_6
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4630..5412)
DNA (783bp) protein (261aa)
Enoyl-CoA hydratase {ECO:0000313|EMBL:KHA64468.1}; EC=4.2.1.17 {ECO:0000313|EMBL:KHA64468.1};; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae;
enoyl-CoA hydratase (EC:4.2.1.17)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003752F80
SCNpilot_cont_300_bf_scaffold_756_7
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5517..5969
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00035F780E
Phenylacetic acid degradation protein {ECO:0000313|EMBL:KHA64467.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="S
phenylacetic acid degradation protein
SCNpilot_cont_300_bf_scaffold_756_8
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5966..6349
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036C6174
Sphingomonas taxi strain 30a NODE_1, whole genome shotgun sequence {ECO:0000313|EMBL:KIU29391.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadac
phenylacetic acid degradation protein
SCNpilot_cont_300_bf_scaffold_756_9
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6519..7166)
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B74075 rbh
DNA, contig: SP604 {ECO:0000313|EMBL:GAN12189.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
hypothetical protein
SCNpilot_cont_300_bf_scaffold_756_10
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7286..7858)
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00037D113E
Sphingomonas taxi strain 30a NODE_4, whole genome shotgun sequence {ECO:0000313|EMBL:KIU28045.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadac
chap
SCNpilot_cont_300_bf_scaffold_756_11
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7999..9492)
DNA (1494bp) protein (498aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000382DF8C rbh
Sphingomonas taxi strain 30a NODE_4, whole genome shotgun sequence {ECO:0000313|EMBL:KIU28046.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadac
Na+/melibiose symporter-like protein
SCNpilot_cont_300_bf_scaffold_756_12
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9489..10316)
DNA (828bp) protein (276aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036D86C6 rbh
Putative oxidoreductase {ECO:0000313|EMBL:GAO40328.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas c
short-chain dehydrogenase/reductase SDR
SCNpilot_cont_300_bf_scaffold_756_13
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10457..11245
DNA (789bp) protein (263aa)
3-oxoacyl-ACP reductase n=1 Tax=Sphingomonas melonis RepID=UPI0003710CD1
Sphingomonas taxi strain 30a NODE_4, whole genome shotgun sequence {ECO:0000313|EMBL:KIU28047.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadac
3-oxoacyl-ACP reductase
SCNpilot_cont_300_bf_scaffold_756_14
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11775..12206
DNA (432bp) protein (144aa)
Rrf2 family transcriptional regulator n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CDCEF
Rrf2 family protein {ECO:0000313|EMBL:EZP54595.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. R
Rrf2 family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_756_15
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12245..12676)
DNA (432bp) protein (144aa)
large conductance mechanosensitive channel protein MscL n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00037533AB
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sph
mechanosensitive ion channel protein MscL
SCNpilot_cont_300_bf_scaffold_756_16
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12783..13376
DNA (594bp) protein (198aa)
membrane protein n=1 Tax=Sphingomonas melonis RepID=UPI000381408B rbh
Sphingomonas taxi strain 30a NODE_100, whole genome shotgun sequence {ECO:0000313|EMBL:KIU27722.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonad
membrane protein rbh
SCNpilot_cont_300_bf_scaffold_756_17
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13384..14259
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI000379210B
Uncharacterized protein {ECO:0000313|EMBL:EZP54592.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
methanol dehydrogenase
SCNpilot_cont_300_bf_scaffold_756_18
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14259..14927
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00031C3D01
membrane protein
Membrane protein {ECO:0000313|EMBL:AJP73282.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC
SCNpilot_cont_300_bf_scaffold_756_19
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14924..15433
DNA (510bp) protein (170aa)
NUDIX hydrolase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B47FFC
NUDIX hydrolase {ECO:0000313|EMBL:KHA64045.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.
NUDIX hydrolase
SCNpilot_cont_300_bf_scaffold_756_20
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15542..15823)
DNA (282bp) protein (94aa)
ETC complex I subunit n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC041
ETC complex subunit I {ECO:0000313|EMBL:KHA64040.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp.
ETC complex subunit I
SCNpilot_cont_300_bf_scaffold_756_21
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15835..18366)
DNA (2532bp) protein (844aa)
ATP-dependent helicase n=1 Tax=Sphingomonas elodea RepID=UPI0002630FF0
Putative ATP-dependent helicase {ECO:0000313|EMBL:GAM02913.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphing
ATP-dependent helicase
SCNpilot_cont_300_bf_scaffold_756_22
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18359..19357)
DNA (999bp) protein (333aa)
carbohydrate kinase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B41809
Putative sugar kinase {ECO:0000313|EMBL:GAM00846.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas par
carbohydrate kinase
SCNpilot_cont_300_bf_scaffold_756_23
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19550..20218
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036C7B98
DNA, contig: SP604 {ECO:0000313|EMBL:GAN12121.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
hypothetical protein
SCNpilot_cont_300_bf_scaffold_756_24
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20215..20571
DNA (357bp) protein (119aa)
Putative lipoprotein n=1 Tax=Sphingomonas sp. S17 RepID=F3X0G3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAM00848.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas p
hypothetical protein
SCNpilot_cont_300_bf_scaffold_756_25
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20638..21585)
DNA (948bp) protein (316aa)
iron transporter n=1 Tax=Sphingomonas melonis RepID=UPI00036CA4CE
fieF; ferrous iron transporter rbh
Cation diffusion facilitator transporter family protein {ECO:0000313|EMBL:EZP50997.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphing
SCNpilot_cont_300_bf_scaffold_756_26
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21582..22175)
DNA (594bp) protein (198aa)
Pyridoxine/pyridoxamine 5'-phosphate oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; EC=1.4.3.5 {ECO:0000256|HAMAP-Rule:MF_01629};; PNP/PMP oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; Pyridoxal 5'-phosphate
pyridoxamine 5''''-phosphate oxidase n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI000287B5DF rbh
pyridoxamine 5'-phosphate oxidase
SCNpilot_cont_300_bf_scaffold_756_27
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22266..23009
DNA (744bp) protein (248aa)
Probable transcriptional regulatory protein SUS17_3945 n=1 Tax=Sphingomonas sp. S17 RepID=F3X3C5_9SPHN rbh
Probable transcriptional regulatory protein SP5_018_00080 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae;
transcriptional regulator
SCNpilot_cont_300_bf_scaffold_756_28
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23135..23623
DNA (489bp) protein (163aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday
crossover junction endodeoxyribonuclease RuvC n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI000288654D
crossover junction endodeoxyribonuclease RuvC
SCNpilot_cont_300_bf_scaffold_756_29
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23934..24533
DNA (600bp) protein (200aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID
Holliday junction DNA helicase RuvA n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003802CEE
ATP-dependent DNA helicase RuvA rbh
SCNpilot_cont_300_bf_scaffold_756_30
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24530..25552
DNA (1023bp) protein (341aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteri
Holliday junction DNA helicase RuvB n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B586A7
ATP-dependent DNA helicase RuvB
Displaying items 1-30 of 60 in total

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