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SCNpilot_cont_300_bf_scaffold_789

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Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_789_1

Not on your lists

comp(403..846)
DNA (444bp) protein (148aa)
CMP deaminase n=1 Tax=Sphingomonas wittichii RepID=UPI000362D122 rbh
Marine sediment metagenome DNA, contig: S01H1_S22504 {ECO:0000313|EMBL:GAG24502.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
CMP/dCMP deaminase, zinc-binding protein
SCNpilot_cont_300_bf_scaffold_789_2
Nitrosopumilus maritimus, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(839..2842)
DNA (2004bp) protein (668aa)
hypothetical protein n=1 Tax=Sphingomonas wittichii RepID=UPI0003095DD8 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX13368.1}; TaxID=436308 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Nitrosopumilus maritimus (strain SC
SCNpilot_cont_300_bf_scaffold_789_3
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2844..3788)
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Sphingomonas wittichii RepID=UPI00036F36D3 rbh
Uncharacterized protein {ECO:0000313|EMBL:CDK00541.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
SCNpilot_cont_300_bf_scaffold_789_4
Thauera sp. SWB20, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4079..5221
DNA (1143bp) protein (381aa)
hypothetical protein n=1 Tax=Sphingomonas wittichii RepID=UPI00037A7988 rbh
Putative thymidine phosphorylase-like protein {ECO:0000313|EMBL:KIN90505.1}; TaxID=1572758 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thau
thymidine phosphorylase
SCNpilot_cont_300_bf_scaffold_789_5
Thauera sp. SWB20, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5214..8855
DNA (3642bp) protein (1214aa)
hypothetical protein n=1 Tax=Sphingomonas wittichii RepID=UPI000370C0BF rbh
Kinase domain protein {ECO:0000313|EMBL:KIN90732.1}; TaxID=1572758 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. SWB20.;"
hypothetical protein rbh
SCNpilot_cont_300_bf_scaffold_789_6
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9123..10019)
DNA (897bp) protein (299aa)
FRG domain-containing protein n=1 Tax=Gluconacetobacter oboediens RepID=UPI000237DE42 rbh
FRG domain protein {ECO:0000313|EMBL:CDW95102.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
FRG domain-containing protein
SCNpilot_cont_300_bf_scaffold_789_7
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10295..13615
DNA (3321bp) protein (1107aa)
hypothetical protein n=1 Tax=Sphingomonas wittichii RepID=UPI0002E38344 rbh
Uncharacterized protein {ECO:0000313|EMBL:CDX40033.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
SCNpilot_cont_300_bf_scaffold_789_8
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13612..15345
DNA (1734bp) protein (578aa)
hypothetical protein n=1 Tax=Sphingomonas wittichii RepID=UPI0002EA22CC rbh
Uncharacterized protein {ECO:0000313|EMBL:BAR58806.1}; TaxID=1355477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium di
NERD domain-containing protein
SCNpilot_cont_300_bf_scaffold_789_9
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15342..18722
DNA (3381bp) protein (1127aa)
hypothetical protein n=1 Tax=Sphingomonas wittichii RepID=UPI00032009DC rbh
Uncharacterized protein {ECO:0000313|EMBL:CDX40027.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
SCNpilot_cont_300_bf_scaffold_789_10
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18719..20617
DNA (1899bp) protein (633aa)
hypothetical protein n=1 Tax=Sphingomonas wittichii RepID=UPI0003044145 rbh
Uncharacterized protein {ECO:0000313|EMBL:CDX40024.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
SCNpilot_cont_300_bf_scaffold_789_11
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20630..21742)
DNA (1113bp) protein (371aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phy
Cytosine-specific methyltransferase n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8T9T7_MESCW rbh
DNA-cytosine methyltransferase rbh
SCNpilot_cont_300_bf_scaffold_789_12
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21851..22006)
DNA (156bp) protein (52aa)
XorII very short patch repair endonuclease n=1 Tax=Sphingomonas wittichii RepID=UPI000368CF2D
DNA mismatch endonuclease Vsr {ECO:0000313|EMBL:ACS60078.1}; TaxID=395491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;"
SCNpilot_cont_300_bf_scaffold_789_13
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22347..24260)
DNA (1914bp) protein (638aa)
conjugal transfer protein TraI n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488620 rbh
Uncharacterized protein {ECO:0000313|EMBL:ENY82811.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
hypothetical protein
SCNpilot_cont_300_bf_scaffold_789_14
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24506..24796)
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488621
Uncharacterized protein {ECO:0000313|EMBL:ENY82812.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
SCNpilot_cont_300_bf_scaffold_789_15
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25024..25617)
DNA (594bp) protein (198aa)
lytic transglycosylase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488622 rbh
Putative lytic transglycosylase {ECO:0000313|EMBL:ENY82813.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphing
putative lytic transglycosylase
SCNpilot_cont_300_bf_scaffold_789_16
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25620..26201)
DNA (582bp) protein (194aa)
conjugal transfer protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488623 rbh
Conjugal transfer protein TraF {ECO:0000313|EMBL:ENY82814.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingo
conjugal transfer protein TraF
SCNpilot_cont_300_bf_scaffold_789_17
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26198..26428)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UWK6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY82815.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
hypothetical protein
SCNpilot_cont_300_bf_scaffold_789_18
Sphingomonas sp. SKA58, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26704..27003)
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248A7B6
Uncharacterized protein {ECO:0000313|EMBL:EAT08823.1}; TaxID=314266 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
hypothetical protein
SCNpilot_cont_300_bf_scaffold_789_19
Sphingomonas sp. SKA58, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27262..27480
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248A7B7
Uncharacterized protein {ECO:0000313|EMBL:EAT08824.1}; TaxID=314266 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
hypothetical protein
SCNpilot_cont_300_bf_scaffold_789_20
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27509..28201
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFB2_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE65085.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgen
SCNpilot_cont_300_bf_scaffold_789_21
Sphingobium sp. HDIP04, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28204..29163
DNA (960bp) protein (320aa)
Uncharacterized protein n=2 Tax=Sphingobium RepID=I5BI24_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EQB05705.1}; TaxID=428994 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp.
hypothetical protein
SCNpilot_cont_300_bf_scaffold_789_22
Komagataeibacter xylinus, Komagataeibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29216..30082
DNA (867bp) protein (289aa)
hypothetical protein n=1 Tax=Vibrio owensii RepID=UPI0003652ABF
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AHI26389.1}; TaxID=1296990 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Komagataeibacter.;" source="Komagataeib
SCNpilot_cont_300_bf_scaffold_789_23
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30195..31169)
DNA (975bp) protein (325aa)
ParB-like protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248A7B9 rbh
ParB-like protein {ECO:0000313|EMBL:ENY82819.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1
ParB-like protein
SCNpilot_cont_300_bf_scaffold_789_24
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31302..31967)
DNA (666bp) protein (222aa)
ParB-like protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UX37_9SPHN
ParB-like protein {ECO:0000313|EMBL:ENY82819.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1
ParB-like protein
SCNpilot_cont_300_bf_scaffold_789_25
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32052..32474)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NCR5_9SPHN
Scaffold3, whole genome shotgun sequence {ECO:0000313|EMBL:KIS32905.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" so
hypothetical protein
SCNpilot_cont_300_bf_scaffold_789_26
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32471..33457)
DNA (987bp) protein (329aa)
Antirestriction protein ArdC n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WH81_9SPHN rbh
Antirestriction protein ArdC {ECO:0000313|EMBL:ENY82821.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopy
antirestriction protein ArdC
SCNpilot_cont_300_bf_scaffold_789_27
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33825..34079)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W5J8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY82822.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
SCNpilot_cont_300_bf_scaffold_789_28
Variovorax sp. WDL1, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34166..34399
DNA (234bp) protein (78aa)
XRE family transcriptional regulator n=1 Tax=Variovorax sp. WDL1 RepID=M1KKV9_9BURK
XRE family transcriptional regulator {ECO:0000313|EMBL:AGF25456.1}; TaxID=207745 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovora
XRE family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_789_29
Variovorax sp. WDL1, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34404..34901)
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI0003802A1C
Uncharacterized protein {ECO:0000313|EMBL:AGF25455.1}; TaxID=207745 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. WDL1.;"
SCNpilot_cont_300_bf_scaffold_789_30
Variovorax sp. WDL1, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34936..35118)
DNA (183bp) protein (61aa)
hypothetical protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248A7C4
Uncharacterized protein {ECO:0000313|EMBL:AGF25454.1}; TaxID=207745 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. WDL1.;"
Displaying items 1-30 of 38 in total

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