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SCNpilot_cont_300_bf_scaffold_809

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_809_1
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

234..1283
DNA (1050bp) protein (350aa)
Vitamin-B12 independent methionine synthase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9VYQ6_9SPHN
Vitamin-B12 independent methionine synthase {ECO:0000313|EMBL:KGB58656.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" so
vitamin-B12 independent methionine synthase
SCNpilot_cont_300_bf_scaffold_809_2
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1472..2866)
DNA (1395bp) protein (465aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphing
dihydrolipoamide dehydrogenase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00035D566B rbh
dihydrolipoamide dehydrogenase
SCNpilot_cont_300_bf_scaffold_809_3
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3108..4457)
DNA (1350bp) protein (450aa)
glutathione reductase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B61DFE rbh
Sphingomonas taxi strain 30a NODE_71, whole genome shotgun sequence {ECO:0000313|EMBL:KIU27173.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
glutathione reductase rbh
SCNpilot_cont_300_bf_scaffold_809_4
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4670..6163)
DNA (1494bp) protein (498aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|R
glucose-6-phosphate isomerase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000382E3C0 rbh
glucose-6-phosphate isomerase rbh
SCNpilot_cont_300_bf_scaffold_809_5
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6265..7122
DNA (858bp) protein (286aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
signal peptidase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B76F85
signal peptidase rbh
SCNpilot_cont_300_bf_scaffold_809_6
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7071..7790
DNA (720bp) protein (240aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule
rnc; ribonuclease III (EC:3.1.26.3)
Ribonuclease 3 n=1 Tax=Sphingomonas sp. S17 RepID=F3X0H5_9SPHN rbh
SCNpilot_cont_300_bf_scaffold_809_7
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7909..8271
DNA (363bp) protein (121aa)
tRNA/rRNA methyltransferase n=1 Tax=uncultured bacterium RepID=K1Z8W7_9BACT
Excinuclease ABC subunit C {ECO:0000313|EMBL:AJR25523.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium s
excinuclease ABC subunit C
SCNpilot_cont_300_bf_scaffold_809_8
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8268..9161
DNA (894bp) protein (298aa)
GTPase Era n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036373E1 rbh
GTPase Era
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;"
SCNpilot_cont_300_bf_scaffold_809_9
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9158..9859)
DNA (702bp) protein (234aa)
NAD-dependent protein deacylase {ECO:0000256|HAMAP-Rule:MF_01121}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01121};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01121}; TaxID=1123269 speci
NAD-dependent deacetylase n=1 Tax=Sphingomonas elodea RepID=UPI00026301FE
NAD-dependent deacetylase
SCNpilot_cont_300_bf_scaffold_809_10
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9916..11916
DNA (2001bp) protein (667aa)
Peptidase S9 prolyl oligopeptidase active site domain protein n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VEP0_CAUST
prolyl oligopeptidase
Peptidase S9 prolyl oligopeptidase active site domain protein {ECO:0000313|EMBL:ADG09183.1}; Flags: Precursor;; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Ca
SCNpilot_cont_300_bf_scaffold_809_11
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(11977..12591)
DNA (615bp) protein (205aa)
30S ribosomal protein S4 n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037C5E4E rbh
30S ribosomal protein S4
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomo
SCNpilot_cont_300_bf_scaffold_809_12
unknown

Not on your lists

comp(12751..12978)
DNA (228bp) protein (76aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_809_13
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13126..13392
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00036851FB
chorismate mutase
Chorismate mutase {ECO:0000313|EMBL:AIT07103.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCNpilot_cont_300_bf_scaffold_809_14
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13560..16025
DNA (2466bp) protein (822aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003787F86 rbh
aminotransferase DegT rbh
Aminotransferase DegT {ECO:0000313|EMBL:AIT07115.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas tax
SCNpilot_cont_300_bf_scaffold_809_15
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16022..17122
DNA (1101bp) protein (367aa)
glycosyl transferase family 2 n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI0002894423 rbh
Uncharacterized protein {ECO:0000313|EMBL:GAM02427.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas p
glycosyl transferase family 2
SCNpilot_cont_300_bf_scaffold_809_16
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17086..17667)
DNA (582bp) protein (194aa)
iron transporter n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B38802 rbh
iron transporter
Iron transporter {ECO:0000313|EMBL:AIT08082.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCNpilot_cont_300_bf_scaffold_809_17
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17717..19240)
DNA (1524bp) protein (508aa)
RND transporter n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CCBE4
RND transporter {ECO:0000313|EMBL:AJR26145.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
NodT family RND efflux system outer membrane lipoprotein
SCNpilot_cont_300_bf_scaffold_809_18
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19237..20118)
DNA (882bp) protein (294aa)
membrane protein n=1 Tax=Sphingomonas elodea RepID=UPI0002631A28
Membrane protein {ECO:0000313|EMBL:KHA64682.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20
secretion protein HlyD family protein
SCNpilot_cont_300_bf_scaffold_809_19
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20115..20330)
DNA (216bp) protein (72aa)
hypothetical protein n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B370D6
Uncharacterized protein {ECO:0000313|EMBL:KHA64671.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
hypothetical protein
SCNpilot_cont_300_bf_scaffold_809_20
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20327..22369)
DNA (2043bp) protein (681aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CCBE1 rbh
Fusaric acid resistance protein {ECO:0000313|EMBL:KHA64670.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingo
fusB; fusaric acid resistance protein FusB/FusC rbh
SCNpilot_cont_300_bf_scaffold_809_21
unknown

Not on your lists

comp(22366..23619)
DNA (1254bp) protein (418aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_809_22
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23660..24847
DNA (1188bp) protein (396aa)
dcp; peptidyl-dipeptidase Dcp (EC:3.4.15.5)
hypothetical protein, partial n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B441CA
Peptidyl-dipeptidase dcp {ECO:0000313|EMBL:EGY02220.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospiril
SCNpilot_cont_300_bf_scaffold_809_23
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25206..27068
DNA (1863bp) protein (621aa)
TonB-dependent receptor plug n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SY57_CAUSK
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:AIT05238.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas t
SCNpilot_cont_300_bf_scaffold_809_24
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27539..28669
DNA (1131bp) protein (377aa)
Arabinose efflux permease family protein n=1 Tax=Caulobacter sp. AP07 RepID=J3AKP0_9CAUL
Arabinose efflux permease family protein {ECO:0000313|EMBL:EJL33286.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="
putative MFS transporter
SCNpilot_cont_300_bf_scaffold_809_25
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28666..29337
DNA (672bp) protein (224aa)
Transcriptional regulator n=1 Tax=Caulobacter sp. AP07 RepID=J2GSA9_9CAUL
Transcriptional regulator {ECO:0000313|EMBL:EJL33285.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp.
TetR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_809_26
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29363..30634
DNA (1272bp) protein (424aa)
PREDICTED: L-gulonolactone oxidase-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C15A6B
FAD-linked oxidoreductase {ECO:0000313|EMBL:EJL33284.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp.
FAD-linked oxidoreductase rbh
SCNpilot_cont_300_bf_scaffold_809_27
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30639..31784
DNA (1146bp) protein (382aa)
Putative amino acid aldolase or racemase n=1 Tax=Caulobacter sp. AP07 RepID=J2HCK3_9CAUL rbh
Putative amino acid aldolase or racemase {ECO:0000313|EMBL:EJL33283.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="
alanine racemase domain-containing protein rbh
SCNpilot_cont_300_bf_scaffold_809_28
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31987..33351
DNA (1365bp) protein (455aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0HF62_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQA98039.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium bad
hypothetical protein
SCNpilot_cont_300_bf_scaffold_809_29
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33348..34361
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0G2Z1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQA98040.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium bad
hemolysin secretion protein D
SCNpilot_cont_300_bf_scaffold_809_30
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34367..35533
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0GBL1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQA98041.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium bad
hypothetical protein
Displaying items 1-30 of 50 in total

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