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SCNpilot_cont_300_bf_scaffold_851

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_851_1
unknown

Not on your lists

1..1302
DNA (1302bp) protein (434aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_851_2
Trichodesmium erythraeum, Trichodesmium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

1382..1816
DNA (435bp) protein (145aa)
Phytanoyl-CoA dioxygenase n=1 Tax=Trichodesmium erythraeum (strain IMS101) RepID=Q10XN0_TRIEI
phytanoyl-CoA dioxygenase
Phytanoyl-CoA dioxygenase {ECO:0000313|EMBL:ABG52994.1}; TaxID=203124 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Trichodesmium.;" source="Trichodesmium erythraeum (strai
SCNpilot_cont_300_bf_scaffold_851_3
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2311..3606
DNA (1296bp) protein (432aa)
Sugar transferase n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VFT4_SPHWW
sugar transferase
Sugar transferase {ECO:0000313|EMBL:ABQ71150.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichi
SCNpilot_cont_300_bf_scaffold_851_4
unknown

Not on your lists

3941..4747
DNA (807bp) protein (269aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_851_5
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4940..6016
DNA (1077bp) protein (359aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=640081 species="Bacter
GDP-mannose 4,6-dehydratase n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QLI0_AZOSU
GDP-mannose 4,6-dehydratase
SCNpilot_cont_300_bf_scaffold_851_6
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6035..7531
DNA (1497bp) protein (499aa)
Polysaccharide biosynthesis protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q125A3_POLSJ rbh
polysaccharide biosynthesis protein
Tax=BJP_08E140C01_Dechloromonas_61_78
SCNpilot_cont_300_bf_scaffold_851_7
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7543..8328
DNA (786bp) protein (262aa)
Methyltransferase FkbM n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q125A4_POLSJ
methyltransferase FkbM
Methyltransferase FkbM {ECO:0000313|EMBL:ABE45888.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strai
SCNpilot_cont_300_bf_scaffold_851_8
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8321..9364
DNA (1044bp) protein (348aa)
Glycosyl transferase, family 2 n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q125A6_POLSJ rbh
glycosyl transferase family protein
Glycosyl transferase, family 2 {ECO:0000313|EMBL:ABE45886.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp
SCNpilot_cont_300_bf_scaffold_851_9
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9415..10353
DNA (939bp) protein (313aa)
dTDP-glucose 4,6-dehydratase n=1 Tax=Methylovorus sp. (strain MP688) RepID=E4QNY2_METS6 rbh
gmd; dTDP-glucose 4,6-dehydratase
gmd; dTDP-glucose 4,6-dehydratase Tax=GWA2_Curvibacter_64_110_curated
SCNpilot_cont_300_bf_scaffold_851_10
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10350..11588
DNA (1239bp) protein (413aa)
C-methyltransferase n=1 Tax=Methylovorus sp. (strain MP688) RepID=E4QNY1_METS6 rbh
c-methyltransferase
Tax=BJP_08E140C01_Dechloromonas_61_78
SCNpilot_cont_300_bf_scaffold_851_11
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11641..12621
DNA (981bp) protein (327aa)
Glycosyl transferase n=1 Tax=Acidovorax sp. CF316 RepID=J1EN09_9BURK
Glycosyl transferase {ECO:0000313|EMBL:EJE53641.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
glycosyl transferase family 2
SCNpilot_cont_300_bf_scaffold_851_12
Endozoicomonas elysicola, Endozoicomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12621..13781
DNA (1161bp) protein (387aa)
group 1 glycosyl transferase (EC:2.4.1.-)
hypothetical protein n=1 Tax=Endozoicomonas elysicola RepID=UPI000381746E
Glycosyl transferase {ECO:0000313|EMBL:KEI70760.1}; TaxID=305900 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Endozoicomonas.;" source="Endozoicomonas elysic
SCNpilot_cont_300_bf_scaffold_851_13
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13892..15361)
DNA (1470bp) protein (490aa)
Polysaccharide biosynthesis family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X1L9_9SPHN
DNA, contig: SP624 {ECO:0000313|EMBL:GAN13736.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
polysaccharide biosynthesis protein
SCNpilot_cont_300_bf_scaffold_851_14
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15444..18209)
DNA (2766bp) protein (922aa)
DNA polymerase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B300F1
DNA polymerase
DNA polymerase {ECO:0000313|EMBL:AJP73637.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8
SCNpilot_cont_300_bf_scaffold_851_15
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18360..19517)
DNA (1158bp) protein (386aa)
Beta-lactamase {ECO:0000256|SAAS:SAAS00063099}; EC=3.5.2.6 {ECO:0000256|SAAS:SAAS00063099};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae;
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00035D02FB
beta-lactamase
SCNpilot_cont_300_bf_scaffold_851_16
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19618..21240)
DNA (1623bp) protein (541aa)
L-aspartate oxidase {ECO:0000256|RuleBase:RU362049}; EC=1.4.3.16 {ECO:0000256|RuleBase:RU362049};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
L-aspartate oxidase (EC:1.4.3.16)
L-aspartate oxidase n=1 Tax=Sphingomonas melonis RepID=UPI0003671769
SCNpilot_cont_300_bf_scaffold_851_17
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21311..22183
DNA (873bp) protein (291aa)
Thiamine-monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128}; Short=TMP kinase {ECO:0000256|HAMAP-Rule:MF_02128};; Short=Thiamine-phosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128};; EC=2.7.4.16 {E
Thiamine-monophosphate kinase n=1 Tax=Sphingomonas sp. S17 RepID=F3WU80_9SPHN
thiamine-monophosphate kinase
SCNpilot_cont_300_bf_scaffold_851_18
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22428..24608
DNA (2181bp) protein (727aa)
K(+)-insensitive pyrophosphate-energized proton pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound proton-translocating pyrophosphatase {ECO:0000256|
hppA; pyrophosphatase (EC:3.6.1.1)
pyrophosphatase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000381F4B3
SCNpilot_cont_300_bf_scaffold_851_19
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24718..26655
DNA (1938bp) protein (646aa)
hypothetical protein n=2 Tax=Sphingomonas melonis RepID=UPI00036A78E5 rbh
Sphingomonas taxi strain 30a NODE_68, whole genome shotgun sequence {ECO:0000313|EMBL:KIU27728.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
putative peptidase
SCNpilot_cont_300_bf_scaffold_851_20
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26780..27001
DNA (222bp) protein (74aa)
translation initiation factor IF-1 n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036238F2
infA; translation initiation factor IF-1
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
SCNpilot_cont_300_bf_scaffold_851_21
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27020..27601
DNA (582bp) protein (194aa)
septum formation protein Maf n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CA610
septum formation inhibitor Maf
Maf-like protein MC45_09665 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphing
SCNpilot_cont_300_bf_scaffold_851_22
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27594..28514
DNA (921bp) protein (307aa)
ribonuclease n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B7234F rbh
Uncharacterized protein {ECO:0000313|EMBL:EZP54610.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
ribonuclease rbh
SCNpilot_cont_300_bf_scaffold_851_23
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28511..28684
DNA (174bp) protein (58aa)
Putative uncharacterized protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WU85_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAM02501.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas p
hypothetical protein
SCNpilot_cont_300_bf_scaffold_851_24
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28842..30617)
DNA (1776bp) protein (592aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V6D3_SPHWW rbh
hypothetical protein
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:ABQ67849.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="
SCNpilot_cont_300_bf_scaffold_851_25
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30718..31431)
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Caulobacter sp. JGI 0001013-O16 RepID=UPI00036FA546
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ABF52414.1}; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="
SCNpilot_cont_300_bf_scaffold_851_26
Collimonas arenae, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31481..33322
DNA (1842bp) protein (614aa)
Putative uncharacterized protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L7R6_9GAMM rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY39412.1}; TaxID=279058 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas arenae.;"
SCNpilot_cont_300_bf_scaffold_851_27
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33394..34122)
DNA (729bp) protein (243aa)
rRNA methyltransferase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488F3B rbh
Sphingomonas taxi strain 30a NODE_34, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26167.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
tRNA/rRNA methyltransferase
SCNpilot_cont_300_bf_scaffold_851_28
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34119..34580)
DNA (462bp) protein (154aa)
NrdR family transcriptional regulator n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B7AD23
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadace
NrdR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_851_29
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34719..34895)
DNA (177bp) protein (59aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00037A9E0E
Uncharacterized protein {ECO:0000313|EMBL:EZP50299.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
SCNpilot_cont_300_bf_scaffold_851_30
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34906..36213)
DNA (1308bp) protein (436aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAM
glyA; serine hydroxymethyltransferase (EC:2.1.2.1) rbh
serine hydroxymethyltransferase n=1 Tax=Sphingomonas melonis RepID=UPI00038062BF rbh
Displaying items 1-30 of 45 in total

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