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SCNpilot_cont_300_bf_scaffold_910

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_910_1
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(79..1797)
DNA (1719bp) protein (573aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000364E3A2
sodium:solute symporter
Tax=BJP_IG2102_Porphyrobacter_62_18
SCNpilot_cont_300_bf_scaffold_910_2
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1794..2630)
DNA (837bp) protein (279aa)
CitryL-CoA lyase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WV37_9GAMM
citryl-CoA lyase
Tax=BJP_IG2102_Porphyrobacter_62_18
SCNpilot_cont_300_bf_scaffold_910_3
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2868..5042
DNA (2175bp) protein (725aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000361C20C
TonB-dependent receptor
Tax=BJP_IG2102_Porphyrobacter_62_18
SCNpilot_cont_300_bf_scaffold_910_4
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5060..6016
DNA (957bp) protein (319aa)
Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YBA2_9BURK
ribokinase
Tax=BJP_IG2102_Porphyrobacter_62_18
SCNpilot_cont_300_bf_scaffold_910_5
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6027..8171
DNA (2145bp) protein (715aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WV42_9GAMM
sulfatase-modifying factor protein
Tax=BJP_IG2102_Porphyrobacter_62_18
SCNpilot_cont_300_bf_scaffold_910_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8179..9753
DNA (1575bp) protein (525aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WV43_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM03335.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter t
hypothetical protein
SCNpilot_cont_300_bf_scaffold_910_7
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9940..11148
DNA (1209bp) protein (403aa)
Putative acyl-CoA transferase/carnitine dehydratase n=1 Tax=Variovorax sp. CF313 RepID=J3CPG1_9BURK
formyl-CoA transferase
Tax=BJP_IG2102_Porphyrobacter_62_18
SCNpilot_cont_300_bf_scaffold_910_8
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11250..11501
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PRK6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS40988.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
hypothetical protein
SCNpilot_cont_300_bf_scaffold_910_9
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11598..12542)
DNA (945bp) protein (315aa)
Carboxyphosphonoenolpyruvate phosphonomutase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6II61_9SPHN rbh
carboxyphosphonoenolpyruvate phosphonomutase rbh
Carboxyphosphonoenolpyruvate phosphonomutase {ECO:0000313|EMBL:CCA91503.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;"
SCNpilot_cont_300_bf_scaffold_910_10
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12575..15412)
DNA (2838bp) protein (946aa)
TonB-dependent receptor n=1 Tax=Novosphingobium sp. PP1Y RepID=F6II62_9SPHN rbh
TonB-dependent receptor rbh
TonB-dependent receptor {ECO:0000313|EMBL:CCA91504.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
SCNpilot_cont_300_bf_scaffold_910_11
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15639..16745
DNA (1107bp) protein (369aa)
alcohol dehydrogenase n=1 Tax=Rhizobium leguminosarum RepID=UPI000367D5C9 rbh
Geraniol dehydrogenase {ECO:0000313|EMBL:AJT61649.1}; TaxID=382 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source=
xylB; aryl-alcohol dehydrogenase
SCNpilot_cont_300_bf_scaffold_910_12
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16758..17507)
DNA (750bp) protein (250aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Novosphingobium sp. PP1Y RepID=F6II52_9SPHN rbh
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:CCA91494.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sour
SCNpilot_cont_300_bf_scaffold_910_13
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17504..18445)
DNA (942bp) protein (314aa)
D-2-hydroxyacid dehydrogensase protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6II53_9SPHN rbh
D-2-hydroxyacid dehydrogenase rbh
D-2-hydroxyacid dehydrogensase protein {ECO:0000313|EMBL:CCA91495.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sourc
SCNpilot_cont_300_bf_scaffold_910_14
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18454..19215)
DNA (762bp) protein (254aa)
Gluconate 5-dehydrogenase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6II54_9SPHN rbh
gluconate 5-dehydrogenase rbh
Gluconate 5-dehydrogenase {ECO:0000313|EMBL:CCA91496.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphing
SCNpilot_cont_300_bf_scaffold_910_15
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19362..20417
DNA (1056bp) protein (352aa)
Zinc-binding dehydrogenase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6II55_9SPHN rbh
zinc-binding dehydrogenase rbh
Zinc-binding dehydrogenase {ECO:0000313|EMBL:CCA91497.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphin
SCNpilot_cont_300_bf_scaffold_910_16
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20414..20749
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI0003787799
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCA91498.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
SCNpilot_cont_300_bf_scaffold_910_17
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20795..21883
DNA (1089bp) protein (363aa)
hypothetical protein n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI00035C9439 rbh
gluconate utilization system LacI family transcriptional regulator rbh
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor {ECO:0000313|EMBL:CCA91499.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria;
SCNpilot_cont_300_bf_scaffold_910_18
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21885..22766
DNA (882bp) protein (294aa)
2-hydroxy-3-oxopropionate reductase (EC:1.1.1.60) rbh
2-hydroxy-3-oxopropionate reductase {ECO:0000313|EMBL:CCA91500.1}; EC=1.1.1.60 {ECO:0000313|EMBL:CCA91500.1};; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sp
2-hydroxy-3-oxopropionate reductase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6II58_9SPHN rbh
SCNpilot_cont_300_bf_scaffold_910_19
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22768..23262
DNA (495bp) protein (165aa)
gluconokinase (EC:2.7.1.12)
Gluconokinase {ECO:0000313|EMBL:CCA91501.1}; EC=2.7.1.12 {ECO:0000313|EMBL:CCA91501.1};; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novos
Gluconokinase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6II59_9SPHN
SCNpilot_cont_300_bf_scaffold_910_20
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23303..24649
DNA (1347bp) protein (449aa)
Major facilitator transporter n=1 Tax=Novosphingobium sp. PP1Y RepID=F6II60_9SPHN rbh
major facilitator superfamily transporter rbh
Major facilitator transporter {ECO:0000313|EMBL:CCA91502.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosp
SCNpilot_cont_300_bf_scaffold_910_21
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24674..24847)
DNA (174bp) protein (58aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI000377B8B8
sodium:dicarboxylate symporter
Sphingomonas taxi strain 30a NODE_18, whole genome shotgun sequence {ECO:0000313|EMBL:KIU27661.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
SCNpilot_cont_300_bf_scaffold_910_22
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25284..25865)
DNA (582bp) protein (194aa)
YceI family protein n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EMI0_METSB
hypothetical protein
YceI family protein {ECO:0000313|EMBL:ACK52108.1}; Flags: Precursor;; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methyl
SCNpilot_cont_300_bf_scaffold_910_23
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25878..26474)
DNA (597bp) protein (199aa)
Cytochrome B561 (Fragment) n=1 Tax=Caulobacter sp. AP07 RepID=J2Q3F4_9CAUL
Cytochrome B561 {ECO:0000313|EMBL:EJL34682.1}; Flags: Fragment;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Cauloba
hypothetical protein
SCNpilot_cont_300_bf_scaffold_910_24
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26471..27091)
DNA (621bp) protein (207aa)
YceI family protein n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EMI2_METSB
hypothetical protein
YceI family protein {ECO:0000313|EMBL:ACK52110.1}; Flags: Precursor;; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methyl
SCNpilot_cont_300_bf_scaffold_910_25
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27127..27735)
DNA (609bp) protein (203aa)
FMN-dependent NADH-azoreductase {ECO:0000256|HAMAP-Rule:MF_01216}; EC=1.7.-.- {ECO:0000256|HAMAP-Rule:MF_01216};; Azo-dye reductase {ECO:0000256|HAMAP-Rule:MF_01216}; FMN-dependent NADH-azo compound o
FMN-dependent NADH-azoreductase n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0PQM3_9RHIZ rbh
azoR; FMN-dependent NADH-azoreductase
SCNpilot_cont_300_bf_scaffold_910_26
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27844..28785
DNA (942bp) protein (314aa)
Putative DNA-binding transcriptional regulator n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0Q2T1_9RHIZ rbh
Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:CCM78940.1}; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium g
LysR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_910_27
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28782..30026)
DNA (1245bp) protein (415aa)
acyl-CoA dehydrogenase n=1 Tax=Sandarakinorhabdus sp. AAP62 RepID=UPI0002ECB602 rbh
Acyl-CoA dehydrogenase-like protein {ECO:0000313|EMBL:KGB53095.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sp
acyl-CoA dehydrogenase domain-containing protein
SCNpilot_cont_300_bf_scaffold_910_28
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30102..30644)
DNA (543bp) protein (181aa)
LysR family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W1S2_9SPHN
HTH-type transcriptional regulator {ECO:0000313|EMBL:KGB53094.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sph
putative transcriptional regulator, LysR family
SCNpilot_cont_300_bf_scaffold_910_29
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31114..33435
DNA (2322bp) protein (774aa)
transketolase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CDE03 rbh
Transketolase {ECO:0000313|EMBL:KKC27123.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
transketolase, central region
Displaying 29 items

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