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SCNpilot_cont_300_bf_scaffold_960

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_960_1
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..319
DNA (318bp) protein (106aa)
cytochrome B n=1 Tax=Sphingomonas melonis RepID=UPI0003622FB0
Cytochrome b {ECO:0000256|RuleBase:RU003385}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
cytochrome B
SCNpilot_cont_300_bf_scaffold_960_2
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

344..1186
DNA (843bp) protein (281aa)
cytochrome C n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037DCDCD rbh
cytochrome C rbh
Cytochrome C {ECO:0000313|EMBL:AIT06485.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCNpilot_cont_300_bf_scaffold_960_3
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1414..1947
DNA (534bp) protein (178aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000
adenine phosphoribosyltransferase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B58715 rbh
adenine phosphoribosyltransferase
SCNpilot_cont_300_bf_scaffold_960_4
unknown

Not on your lists

1963..2244
DNA (282bp) protein (94aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_960_5
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2350..2538)
DNA (189bp) protein (63aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00038231B2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIT06483.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas t
SCNpilot_cont_300_bf_scaffold_960_6
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2774..3280
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00038231B2
Sphingomonas taxi strain 30a NODE_25, whole genome shotgun sequence {ECO:0000313|EMBL:KIU28124.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
hypothetical protein
SCNpilot_cont_300_bf_scaffold_960_7
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3211..4950)
DNA (1740bp) protein (580aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037FADCA
phosphodiesterase
Phosphodiesterase {ECO:0000313|EMBL:AIT06481.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCNpilot_cont_300_bf_scaffold_960_8
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5051..6151)
DNA (1101bp) protein (367aa)
Ribosome-binding ATPase YchF n=1 Tax=Sphingomonas sp. S17 RepID=F3X315_9SPHN rbh
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphin
GTP-binding protein rbh
SCNpilot_cont_300_bf_scaffold_960_9
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6231..8042)
DNA (1812bp) protein (604aa)
small-conductance mechanosensitive channel n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B71E5F rbh
Uncharacterized protein {ECO:0000313|EMBL:AHE56866.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
hypothetical protein
SCNpilot_cont_300_bf_scaffold_960_10
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8158..8739)
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036D7104 rbh
Sphingomonas taxi strain 30a NODE_30, whole genome shotgun sequence {ECO:0000313|EMBL:KIU28438.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
hypothetical protein
SCNpilot_cont_300_bf_scaffold_960_11
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8742..9311)
DNA (570bp) protein (190aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBa
Peptidyl-tRNA hydrolase n=1 Tax=Sphingomonas sp. S17 RepID=F3X312_9SPHN
peptidyl-tRNA hydrolase
SCNpilot_cont_300_bf_scaffold_960_12
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(9393..10016)
DNA (624bp) protein (208aa)
50S ribosomal protein L25 n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000375225E rbh
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=1123269 s
50S ribosomal protein L25
SCNpilot_cont_300_bf_scaffold_960_13
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10248..11144)
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036A7649 rbh
Putative GumN-family protein {ECO:0000313|EMBL:GAM00185.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomo
polysaccharide biosynthesis protein GumN
SCNpilot_cont_300_bf_scaffold_960_14
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11232..12086
DNA (855bp) protein (285aa)
Glycine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104892}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104898};; Glycyl-tRNA syntheta
glycyl-tRNA synthetase subunit alpha n=1 Tax=Sphingomonas elodea RepID=UPI0002630CD9
glycyl-tRNA synthetase subunit alpha
SCNpilot_cont_300_bf_scaffold_960_15
Sphingobium indicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12083..14350
DNA (2268bp) protein (756aa)
Glycine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039777}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039811};; Glycyl-tRNA synthetas
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI000361BA71 rbh
glycine-tRNA ligase
SCNpilot_cont_300_bf_scaffold_960_16
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

comp(14247..15425)
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H2J2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KIY13550.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
SCNpilot_cont_300_bf_scaffold_960_17
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15541..17031
DNA (1491bp) protein (497aa)
pyruvate phosphate dikinase (EC:2.7.9.1)
Pyruvate, phosphate dikinase n=1 Tax=Sphingomonas sp. S17 RepID=F3X231_9SPHN
PpdK protein {ECO:0000313|EMBL:GAN12175.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis
SCNpilot_cont_300_bf_scaffold_960_18
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17057..17626
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC3E2
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
Conserved Putative membrane protein
SCNpilot_cont_300_bf_scaffold_960_19
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17623..18153
DNA (531bp) protein (177aa)
Integral membrane protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9USV3_9SPHN
Integral membrane protein {ECO:0000313|EMBL:ENY81404.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis
Conserved Putative membrane protein
SCNpilot_cont_300_bf_scaffold_960_20
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18259..19149)
DNA (891bp) protein (297aa)
prephenate dehydratase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B46024
Prephenate dehydratase family protein {ECO:0000313|EMBL:EZP52480.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="
prephenate dehydratase
SCNpilot_cont_300_bf_scaffold_960_21
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19257..19922
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037BE892 rbh
Cytochrome C {ECO:0000313|EMBL:KHA64236.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
cytochrome C rbh
SCNpilot_cont_300_bf_scaffold_960_22
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20137..21009)
DNA (873bp) protein (291aa)
lysine decarboxylase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000366E49B
lysine decarboxylase
Lysine decarboxylase {ECO:0000313|EMBL:AIT06724.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi
SCNpilot_cont_300_bf_scaffold_960_23
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21020..21649)
DNA (630bp) protein (210aa)
extensin family protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B77BE7 rbh
Extensin {ECO:0000313|EMBL:KHA64238.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
extensin
SCNpilot_cont_300_bf_scaffold_960_24
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21931..23028
DNA (1098bp) protein (366aa)
Phosphoserine transaminase {ECO:0000256|SAAS:SAAS00182444}; EC=2.6.1.52 {ECO:0000256|SAAS:SAAS00182444};; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphing
phosphoserine aminotransferase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI000319EF83
phosphoserine aminotransferase
SCNpilot_cont_300_bf_scaffold_960_25
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23133..24710
DNA (1578bp) protein (526aa)
3-phosphoglycerate dehydrogenase n=1 Tax=Sphingomonas melonis RepID=UPI00037A97B2
Sphingomonas taxi strain 30a NODE_12, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26206.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
3-phosphoglycerate dehydrogenase
SCNpilot_cont_300_bf_scaffold_960_26
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24886..25980
DNA (1095bp) protein (365aa)
tRNA synthetase class II n=1 Tax=Sphingomonas melonis RepID=UPI0003740BBE
Sphingomonas taxi strain 30a NODE_12, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26241.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
tRNA synthetase class II rbh
SCNpilot_cont_300_bf_scaffold_960_27
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26102..27391
DNA (1290bp) protein (430aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.
adenylosuccinate synthetase (EC:6.3.4.4) rbh
adenylosuccinate synthetase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B46613 rbh
SCNpilot_cont_300_bf_scaffold_960_28
Homo sapiens, Homo, Primates, Mammalia, Chordata, Metazoa

Not on your lists

comp(27484..27777)
DNA (294bp) protein (98aa)
Putative uncharacterized protein n=1 Tax=Neospora caninum (strain Liverpool) RepID=F0VID4_NEOCL
Mucin-7; Short=MUC-7;; Apo-MG2; Salivary mucin-7; Flags: Precursor;; TaxID=9606 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primate
SCNpilot_cont_300_bf_scaffold_960_29
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28093..29160)
DNA (1068bp) protein (356aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU0
chorismate synthase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037D5375 rbh
chorismate synthase
SCNpilot_cont_300_bf_scaffold_960_30
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29157..29681)
DNA (525bp) protein (175aa)
hypothetical protein n=2 Tax=Sphingomonas melonis RepID=UPI0003805824
Sphingomonas taxi strain 30a NODE_12, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26210.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
putative acetyltransferase
Displaying items 1-30 of 50 in total

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