ggKbase home page

SCNpilot_cont_300_bf_scaffold_2346

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2346_1
unknown

Not on your lists

comp(3..197)
DNA (195bp) protein (65aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2346_2
Citromicrobium bathyomarinum, Citromicrobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(213..452)
DNA (240bp) protein (80aa)
hypothetical protein n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD056B
SCNpilot_cont_300_bf_scaffold_2346_3
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

818..1042
DNA (225bp) protein (75aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaprot
acetate kinase (EC:2.7.2.1)
Acetate kinase n=1 Tax=Sphingomonas sp. S17 RepID=F3X1H3_9SPHN
SCNpilot_cont_300_bf_scaffold_2346_4
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1039..1293
DNA (255bp) protein (85aa)
Enoyl-[acyl-carrier-protein] reductase [NADH] {ECO:0000313|EMBL:KHS45225.1}; EC=1.3.1.9 {ECO:0000313|EMBL:KHS45225.1};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonad
Enoyl-[acyl-carrier-protein] reductase [NADH] n=1 Tax=Sphingobium baderi LL03 RepID=T0HT37_9SPHN
short-chain dehydrogenase
SCNpilot_cont_300_bf_scaffold_2346_5
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1345..1812
DNA (468bp) protein (156aa)
Enoyl-[acyl-carrier-protein] reductase [NADH] {ECO:0000256|PIRNR:PIRNR000094}; EC=1.3.1.9 {ECO:0000256|PIRNR:PIRNR000094};; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingom
Enoyl-[acyl-carrier-protein] reductase (NADH) n=1 Tax=Sphingomonas sp. S17 RepID=F3X1H5_9SPHN rbh
short-chain dehydrogenase
SCNpilot_cont_300_bf_scaffold_2346_6
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1840..2259)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0HN28_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KEQ54716.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlor
SCNpilot_cont_300_bf_scaffold_2346_7
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2535..3947
DNA (1413bp) protein (471aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit bet
atpD; ATP synthase F1, beta subunit (EC:3.6.3.14)
ATP synthase subunit beta n=1 Tax=Sphingobium baderi LL03 RepID=T0GJ22_9SPHN rbh
SCNpilot_cont_300_bf_scaffold_2346_8
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3944..4354
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0GL13_9SPHN
ATP synthase epsilon chain {ECO:0000313|EMBL:KHS45229.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphing
atpC; ATP synthase subunit epsilon 2
SCNpilot_cont_300_bf_scaffold_2346_9
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4351..4626
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0HT43_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KHS45230.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi
F0F1-ATPase (fragment)
SCNpilot_cont_300_bf_scaffold_2346_10
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4623..4889
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0HN35_9SPHN
F1/F0 ATPase, Methanosarcina type, subunit 2 {ECO:0000313|EMBL:KEQ54720.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" sour
SCNpilot_cont_300_bf_scaffold_2346_11
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4886..5587
DNA (702bp) protein (234aa)
atpB; ATP synthase F0, A subunit (EC:3.6.3.14)
F0F1 ATP synthase subunit A n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00038262A2 rbh
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:
SCNpilot_cont_300_bf_scaffold_2346_12
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5584..5826
DNA (243bp) protein (81aa)
F0F1 ATP synthase subunit C {ECO:0000313|EMBL:KEQ54722.1}; EC=3.6.3.14 {ECO:0000313|EMBL:KEQ54722.1};; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomona
F0F1 ATP synthase subunit C n=1 Tax=Sphingobium baderi LL03 RepID=T0GJ26_9SPHN
atpE; ATP synthase subunit c 2
SCNpilot_cont_300_bf_scaffold_2346_13
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5828..6577
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00036AD619 rbh
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subuni
ATP synthase delta (OSCP) subunit
SCNpilot_cont_300_bf_scaffold_2346_14
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6561..8081
DNA (1521bp) protein (507aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit a
F0F1 ATP synthase subunit alpha n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00036485A6 rbh
F0F1 ATP synthase subunit alpha
SCNpilot_cont_300_bf_scaffold_2346_15
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8078..8926
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00037EF4D8 rbh
F-type H+-transporting ATPase subunit gamma {ECO:0000313|EMBL:KEZ16474.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" sourc
H+transporting two-sector ATPase subunit gamma
SCNpilot_cont_300_bf_scaffold_2346_16
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8978..9664
DNA (687bp) protein (229aa)
Oleate hydratase (EC:4.2.1.53)
Uncharacterized protein n=2 Tax=Alphaproteobacteria RepID=T0GAD3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB00721.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium bad
Displaying 16 items

View Taxonomy